Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0117 ATGAATGATAGCAGTAACAACGACGGGAATGGAAGTAGTAATAATAGTAATAGTCATAATCATAACTGGTTGGGGTTTTCTCTCTCACCCCACATGAAAATGGAGGTTACTTCTTCTGGTCCTTCTCTTCATCATCACGATCATCATCAGTATCATCATCATCATCATCCACCTCAAGCATCATCCGCTGCTGTTTCTAGCTCTGTCCCAACAGCCTTCTGTCTCTCGCCTTCACAGCTCAGCAACTACGGGTTATGTTACGGCGCAGCGGAAAACGCTGCGTTTCATTCTCCTCTGACCGTCATGCCTCTCAAGTCCGATGGCTCTCTTTGTATAATGGAAGCTCTCACTAGATCACAAACTCAAGTGATGGTGCCGAGTTCGTCTCCGAAGCTGGAGGACTTTCTGGGTGGTGCAACCATGGGAAGTCACGACGCAATGGCGCTGAGTCTAGACAGCATCTACTACAGCAGCCAAAATGCAGAGGCAGCTCAAACTCAAGCCCAGAGAGACCATTCTCTGGACTTTCTTTCTGAGCCATTCAGGCCACAAGACCACATGGCCGTTCAATCGCACCCTTATTATTCTGGAATTGCTTGCCATGGTATTTACCAGGCGCCATTGGAGCATCAAAGCAAGGACCCCCAAATGGCTCCAGTGGCAGACGAAGGCATTGCTTGCTTCAAGAACTGGGTGGCTACCAGGGAGTATTCTAGTCATCAAGGTGTGGAGCAGAAGAATGGAGGCATGGCGGATGAAGGTGGAGCTTCTGGAGCTGCTGGTAAAGGAGGGTGTGGAGACTTGCAGTCTCTGAGCTTATCGGTGAGCCCGGGTTCACAGTCTAGCTGTGTGACTGTACCGCAGCAGATCTCCCCCTCTGCCACGGACATGGTGGCCATGGAAGCCAAGAAGAGAGGTCACGGGAAGTTAGGCCAGAAGCAGCCTGTGCATAGGAAATCCATCGACACTTTTGGCCAGAGAACGTCGCAGTATAGAGGAGTCACAAGGCACAGATGGACTGGTAGATATGAAGCGCATTTGTGGGATAACAGTTGCAAGAAGGAAGGGCAGACCAGGAAAGGAAGACAAGTTTATCTGGGGGGCTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTCGCAGCCCTGAAGTATTGGGGACCCTCAACGCATATTAACTTTCCGCTGGAAAATTACCAGGCAGAGCTTGAAGAAATGAAGAACATGAGCAGACAAGAATATGTTGCCCACCTAAGAAGGAAAAGCAGTGGATTTTCACGGGGGGCTTCAATGTACAGAGGCGTGACAAGGCACCACCAACACGGAAGATGGCAAGCCAGGATTGGTAGAGTTGCAGGAAACAAGGACCTTTATCTTGGAACATTCAGTACTCAGGAGGAAGCAGCTGAGGCATACGACATAGCCGCAATCAAATTCCGCGGTGTGAATGCAGTCACAAACTTTGACATATCAAGATACGACGTTGAGAGAATCATGGCCAGCAACACCCTTCTGGCTGGTGAGCTGGCTCGACGAAACAAAGACTGCGAGCCAAGAAGTGAAGCCGTGGAGTACAATCACCATGCATCATCGAACCAGAGCACTGGGGAAACTGTGGAGCCCCAAAGAAACAACAACAGCAGCAGCAGCAACAACCACCACCACAGCGAGAATGGCTCAGAGTGGAAGATGCTGTATCAGTCTCCTGACCAGAAAACTTCCTTGAACTGCGGAAATTACAGGAACTCAGCCATCTCCATGGCCCTACAGGATCTCATAGGGATTGACTCAGTGGGAACTGGGCAGGCCATGCTGGAGGACACCACTAGCACCAAGCTAGGCACTCATGTTTCAAACCCGTCGTCGCTGGTCACGAGTTTAAGCAGTTCAAGAGAGGGAAGCCCAGATAAGTCGGGCCCCACAATGCTCTTCCCAAAGCCTCCAATGGCAGCATCATCGAAGATGGTAAATGTAAACCCCATAAACAATGGAGTGAGCTCATGGTTTCCCAGGCCAGCCTCTGCAATTTCAATGTCTCACTTGCCAGTTTTTGCTGCCTGGAACGATAGCTAG 2076 0.5005 MNDSSNNDGNGSSNNSNSHNHNWLGFSLSPHMKMEVTSSGPSLHHHDHHQYHHHHHPPQASSAAVSSSVPTAFCLSPSQLSNYGLCYGAAENAAFHSPLTVMPLKSDGSLCIMEALTRSQTQVMVPSSSPKLEDFLGGATMGSHDAMALSLDSIYYSSQNAEAAQTQAQRDHSLDFLSEPFRPQDHMAVQSHPYYSGIACHGIYQAPLEHQSKDPQMAPVADEGIACFKNWVATREYSSHQGVEQKNGGMADEGGASGAAGKGGCGDLQSLSLSVSPGSQSSCVTVPQQISPSATDMVAMEAKKRGHGKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDCEPRSEAVEYNHHASSNQSTGETVEPQRNNNSSSSNNHHHSENGSEWKMLYQSPDQKTSLNCGNYRNSAISMALQDLIGIDSVGTGQAMLEDTTSTKLGTHVSNPSSLVTSLSSSREGSPDKSGPTMLFPKPPMAASSKMVNVNPINNGVSSWFPRPASAISMSHLPVFAAWNDS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0117 691 Gene3D AP2/ERF domain 329 398 IPR036955 GO:0003700|GO:0006355
Bisa05g0117 691 Gene3D AP2/ERF domain 432 492 IPR036955 GO:0003700|GO:0006355
Bisa05g0117 691 PRINTS Ethylene responsive element binding protein signature 472 492 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 PRINTS Ethylene responsive element binding protein signature 331 342 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 FunFam AP2-like ethylene-responsive transcription factor 431 492 - -
Bisa05g0117 691 MobiDBLite consensus disorder prediction 611 637 - -
Bisa05g0117 691 MobiDBLite consensus disorder prediction 526 559 - -
Bisa05g0117 691 SUPERFAMILY DNA-binding domain 329 398 IPR016177 GO:0003677
Bisa05g0117 691 ProSiteProfiles AP2/ERF domain profile. 330 396 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 FunFam AP2-like ethylene-responsive transcription factor ANT 329 398 - -
Bisa05g0117 691 SMART rav1_2 330 402 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 SMART rav1_2 432 496 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 MobiDBLite consensus disorder prediction 1 63 - -
Bisa05g0117 691 ProSiteProfiles AP2/ERF domain profile. 432 490 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 MobiDBLite consensus disorder prediction 518 559 - -
Bisa05g0117 691 Coils Coil 397 417 - -
Bisa05g0117 691 SUPERFAMILY DNA-binding domain 431 492 IPR016177 GO:0003677
Bisa05g0117 691 CDD AP2 431 492 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 124 565 - -
Bisa05g0117 691 Pfam AP2 domain 433 482 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 Pfam AP2 domain 330 388 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 CDD AP2 329 396 IPR001471 GO:0003700|GO:0006355
Bisa05g0117 691 MobiDBLite consensus disorder prediction 611 643 - -
Bisa05g0117 691 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0117 Bisa-ChrBisa05 1851037 1854235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0117 413 691 AP2-EREBP Transcription Factor Family AT4G37750 25.868 1.64e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa05g0117 AP2 1.6e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0117 05 1851037 1854235 Bisa09g1782 09 27704055 27706797 CCT
Bisa05g0117 05 1851037 1854235 Bisa05g0117 05 1851037 1854235 ECH