Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0116 ATGGGTGATCAAGAAAATACCATGGGTTTTCAACATGGCCACGACACTATCCTCAATTGTCCATCATCGGGTTTGAGCACAAATGTATCAGAGATCGCTATTAGCTGTGTGTCTATGGCTAAGCCTCCTCTAGTGGCTAACCCTTTTCTTGGCTCTTCTTCCACTTGGGATCGTCTTGTTTCATTGAATCAGACTCAGACTTTTGGAGGCTCTTCCATGGTTTCTCATAGTGAGTTTGGCAGTTCATCTTACCCTCTTGGGTTGGCAAATCATGGATTGAGTACCACCTCTCACCTTCTTCAATATATGTCTGACTCCAATTTTGCTGTTCCCTCCTATGCAAGTGCAAGCTTCTCAGAAATGGTAGGCTCATTTCCCCAACCTGGGTGTGCTTATTTGGAGCCACCCATGAAAGGGGCTTCAATAAATGGTTCACGGTCAAAGCTTGAGGATTCAACTCCTGAAGATGGACGCATAGGATCTGCAGCCAATGGAAGTAGAAGAAAACGAGGGCTTGATCATAATTCTACTCTCAGTCCAAATAAGAATGCTGAAGGGGAACCCATGAAGGATCCTTCTGCAAAGAGCTCTGATGGTGGGAAAGGACAAGATGAGAAGAGACAAAAAATTGAGCAAAGTAATACCAGTGCAGATTTGCGGGGTAAGCAATCATCAAAGCAAGCTAAAGACAACTCTAACAGTGGAGAAGCTCCCAAAGAGAACTTCATACATGTGAGGGCTCGAAGAGGTCAAGCTACAAACAGTCATAGCCTCGCAGAAAGGGTAAGAAGAGAGAAGATTAGCGAACGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGGAAAGCAGTCATGCTGGATGAGATTATTAACTACGTTCAATCGCTGCAGCAACAGGTTGAGTTTCTGTCAATGAAACTTGCCACTGTGAACCCAGAACTGAATTTTGATGTAGAGCGGATCCTATCCAAAGATATTCTCCAGTCACGCATTGCAAATGGACCACTTGCTGGATATGGTATGAACTCCTCACTCTCATTTCCCAGTGGAAGTTTCCAGGGAGCTTTACCTGGCATACCAAACACGTCGCCACAATTCCCTCCTTTGCCTCAGAATGTGTTGGAGCATGAGTTACAAAACTTGTATGCAATGGGATATAATTCCAGTGCAGCTCTTGACAACTTGGGACCCAGTGGGAGGTTGAAGCCAGAGTTATAA 1233 0.4469 MGDQENTMGFQHGHDTILNCPSSGLSTNVSEIAISCVSMAKPPLVANPFLGSSSTWDRLVSLNQTQTFGGSSMVSHSEFGSSSYPLGLANHGLSTTSHLLQYMSDSNFAVPSYASASFSEMVGSFPQPGCAYLEPPMKGASINGSRSKLEDSTPEDGRIGSAANGSRRKRGLDHNSTLSPNKNAEGEPMKDPSAKSSDGGKGQDEKRQKIEQSNTSADLRGKQSSKQAKDNSNSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIANGPLAGYGMNSSLSFPSGSFQGALPGIPNTSPQFPPLPQNVLEHELQNLYAMGYNSSAALDNLGPSGRLKPEL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0116 410 MobiDBLite consensus disorder prediction 188 213 - -
Bisa05g0116 410 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 251 301 IPR011598 GO:0046983
Bisa05g0116 410 MobiDBLite consensus disorder prediction 136 241 - -
Bisa05g0116 410 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 162 351 IPR024097 GO:0006355
Bisa05g0116 410 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 249 319 IPR036638 GO:0046983
Bisa05g0116 410 CDD bHLH_AtBPE_like 241 326 - -
Bisa05g0116 410 Gene3D - 248 322 IPR036638 GO:0046983
Bisa05g0116 410 MobiDBLite consensus disorder prediction 214 238 - -
Bisa05g0116 410 FunFam Basic helix-loop-helix transcription factor 248 320 - -
Bisa05g0116 410 Pfam Helix-loop-helix DNA-binding domain 254 302 IPR011598 GO:0046983
Bisa05g0116 410 SMART finulus 257 307 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0116 Bisa-ChrBisa05 1829564 1832162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0116 1 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 45.843 1.37e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa05g0116 HLH 4.3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0116 05 1829564 1832162 Bisa05g0116 05 1829564 1832162 ECH