Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0106 ATGGGTTTCGCTGATATCTCTAATACAGGGCTTGGACTTGGTCTCGGACTTGGTCTCCATGATCATGAGTCAGAGAAAAATTGCAGGAGGCTCGCTTGCGACAGAGAAAGCCAACACAAGAGAGAGGAGGATCCATTGAAATGCAACAAGGTGAAGGTGTACCCTTCTCTCACGTTAGGACCGCCTGATCATCAAGAGGCAAGCCAGCTTGCCACAAAGACTGATCAATCTGCAGCAACTTTGCTTGCTATGGCGTCTTCCGCGAGCGCAGCCTCTTCGTTTTCCAACTCCTCTAGCATCAAGAGGGAGAGAGAGGTTGGGGGTGATGACTTTGATGTAGAAGAGGTAGACAAGTTTAATGCTTCCAAAGTAGGAGAGGTAGACGAAGATGGTAATCCCAGGAAGAAACTTAGGCTCACCAAACAGCAATCTGCTGTTTTAGAAGACAGCTTCAAAGAGCACACCACTCTCAATCCTAAGCAAAAGCAAGAATTGGCAAGGAAGCTAAACCTTCGTGCCAGACAAGTAGAAGTGTGGTTCCAAAACAGGAGAGCCAGGACGAAACTGAAACAAACCGAAGTGGACTGTGAGTTACTCAAGAAGTGCTGTGAGACACTGACGGAAGAGAACAAGAGGCTGCAAAAGGAGCTGCAAGAGCTTAGATCAATGAAAACGACGTCGTCGCAGGGACCTTTTTATATGCAGCTTCCGGCAGCTACCCTCACCGTATGCCCTTCTTGCGAGAGAATTTGCGGCGGAGCCGGCGCCGCCGCTAACGGCTCCTCCCCCACCACCGCCTTCCTTATTGGATCCAAGGCCCATCACTTGTTCAAAAGTACCTATCCATTTACCCACTCATCTGCAGCTTGCTAG 873 0.4948 MGFADISNTGLGLGLGLGLHDHESEKNCRRLACDRESQHKREEDPLKCNKVKVYPSLTLGPPDHQEASQLATKTDQSAATLLAMASSASAASSFSNSSSIKREREVGGDDFDVEEVDKFNASKVGEVDEDGNPRKKLRLTKQQSAVLEDSFKEHTTLNPKQKQELARKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENKRLQKELQELRSMKTTSSQGPFYMQLPAATLTVCPSCERICGGAGAAANGSSPTTAFLIGSKAHHLFKSTYPFTHSSAAC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0106 290 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 12 260 - -
Bisa05g0106 290 SMART halz 190 236 IPR003106 GO:0006355|GO:0043565
Bisa05g0106 290 Coils Coil 196 226 - -
Bisa05g0106 290 FunFam Homeobox-leucine zipper protein 18 119 195 - -
Bisa05g0106 290 ProSitePatterns 'Homeobox' domain signature. 165 188 IPR017970 GO:0000981|GO:0006355
Bisa05g0106 290 ProSiteProfiles 'Homeobox' domain profile. 130 190 IPR001356 GO:0003677
Bisa05g0106 290 Pfam Homeobox associated leucine zipper 190 224 IPR003106 GO:0006355|GO:0043565
Bisa05g0106 290 SMART HOX_1 132 194 IPR001356 GO:0003677
Bisa05g0106 290 Pfam Homeodomain 134 188 IPR001356 GO:0003677
Bisa05g0106 290 CDD homeodomain 133 191 IPR001356 GO:0003677
Bisa05g0106 290 Gene3D - 126 195 - -
Bisa05g0106 290 SUPERFAMILY Homeodomain-like 130 191 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0106 Bisa-ChrBisa05 1637591 1638690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0106 1 290 Homeobox Transcription Factor Family AT2G22800 50.000 3.20e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa05g0106 Homeodomain 1e-16 CL0123