Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0102 ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAATGTTAAGAGAGGCCCATGGTCTCCCGAAGAAGACGCTGCTCTCAAGACCTATGTGGAGGTTCATGGCACTGGTGGCAATTGGATTGCATTGCCCAAAAAAGCTGGACTTCGGAGGTGTGGCAAGAGCTGCCGTCTACGGTGGCTCAATTATCTCAGGCCTGACATCAAACATGGAGGCTTCACTGAAGAAGAAGACAACATCATTTGTACCCTCTATGGTCAAATGGGAAGCAGATGGTCTGCCATAGCCTCTCAGCTTCCGGGTAGAACAGACAATGATGTGAAGAACTACTGGAACACGAAACTCAAGAAGAAGCTAATGGCCGGAAAAGTGAACCTCAAAACAATAGCTAGCAGTAACAGTAACAGTAACAGTAACACTTTTCCTTCGACTCCATTATTACTGACTTATAACCTCGAAACCCAAAATCAAAGTTCAGACTATCGTGCTTCGCAAAACCAGAGTCCTTCACCCTCAACTCTGCCCATCCTGACCGATGCTAATTCTGGATATAGCATTAACACAGCTCAAACCATGAGTTTTGACCCAACTCAATTATACAGTCCCGGGTTCATGGATGTCTCAGAAATAAGTGCAAGTAATTCAAGGAACAACAGTCACATGATGTCGTCCTTGTCTCAGGAAGGTTCAAGCATTTCAGATTCATCTTTAATTGCAATGGATAACAAGTGTTTATCGCTGCTGGATCATGCTGGTGATGAAGCTACCCATCAAGTGTTGATGGATTTCGGGTTTGGATTTGCCGGTGACCTTGTCGATGGACTTAATTATTACTCCCAAGAGAAAGTTTGTGAATTTGCTCCAAGTTGCTATCCTGAGTTGGTTGATTTTAGCTATGCTGATGGGCTGAATCAAAATGTTGTTTAG 921 0.4419 MGRAPCCDKANVKRGPWSPEEDAALKTYVEVHGTGGNWIALPKKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDNIICTLYGQMGSRWSAIASQLPGRTDNDVKNYWNTKLKKKLMAGKVNLKTIASSNSNSNSNTFPSTPLLLTYNLETQNQSSDYRASQNQSPSPSTLPILTDANSGYSINTAQTMSFDPTQLYSPGFMDVSEISASNSRNNSHMMSSLSQEGSSISDSSLIAMDNKCLSLLDHAGDEATHQVLMDFGFGFAGDLVDGLNYYSQEKVCEFAPSCYPELVDFSYADGLNQNVV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0102 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa05g0102 306 MobiDBLite consensus disorder prediction 155 177 - -
Bisa05g0102 306 FunFam Transcription factor RAX3 70 139 - -
Bisa05g0102 306 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa05g0102 306 Gene3D - 70 140 - -
Bisa05g0102 306 CDD SANT 71 113 IPR001005 -
Bisa05g0102 306 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bisa05g0102 306 FunFam Transcription factor RAX3 7 68 - -
Bisa05g0102 306 Gene3D - 7 68 - -
Bisa05g0102 306 SMART sant 13 64 IPR001005 -
Bisa05g0102 306 SMART sant 67 115 IPR001005 -
Bisa05g0102 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bisa05g0102 306 PANTHER OS09G0431300 PROTEIN 1 231 - -
Bisa05g0102 306 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bisa05g0102 306 CDD SANT 16 62 IPR001005 -
Bisa05g0102 306 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bisa05g0102 306 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0102 Bisa-ChrBisa05 1543164 1544655 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0102 1 118 MYB Transcription Factor Family AT3G49690 82.203 3.31e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g0102 Myb_DNA-binding 4.9e-13 CL0123