Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0085 ATGTTTCTGAGACGACCTGCCATGAACAGGAGTTTGAACAGAGAGAATCCAAATATTTTGATTGTGATGATTGCAGAGAAGCAGATAATAGGAGGTGGTGAGGAGGACAAAAGAGACCAGAGAAATGGGCCCAGTAAAGCCTGCCACAGAAATGAGTGGCTCTGCACCAAAGAGCAATGTGTTGCCCTTTTCCCCCTCTCTCCCACTCTCCTTTCTCTGTTTCTCTTTCCTGTTACTGTTTTGGCCCAGACTAGACTACCCAGAACTAACTCAAACAGTGATCATGCAGTTCTTGATTCAGTAAAGGTGCCTCTTGTTAAATTTATGTGCTTCCACTTAATCGCTATATCGATGGAGAATGAGATGTTCAGTGCTCCAATGGGCGAAATCCCACAACACTCAACCCCAAACCCTCTCATTCAGTGCTATTCATTTGACCTTAATGACCAAACACGCATCATGAATGGAATTTCAATGCTGCAAGGCGATCTCTCTCTCATATCTAATGTCCAGATAGATGTTCCTCTTATTAACCCTGCCTGCATTCCTGATTCTAACTCCTCAGTCACATCACAAGCAAAGAACATTGTAGGAGATGCCTCCCTTGGAACTCTGAACAACAATCAGTTTCAAGATCAACTAGCTGAAGGAACCACAATCACTCCTGCTTCACTTGCTGCCATTCTTGCCGCAAGATTTGCCCTTCAAGAAAAATCACCAGCTTTGTCTCCCATATTGGAGGATTTGGCACCATATATCTTGAATAATTGGCAGGATACTTCAAATTCAAACCCTTTGCTTCCAACTTTCGGTGAAGTACTCGGTACTTATTCGTCCCTGGCAAACCCGGATCCGGAAGCATGGACACCATCAAATGCTGCAAACTTGACCCATCATGCTTATGATTCCCCTAATTTTAGCAATGAGCTGTCATTAAGAATAGCAACATCTCCAGTAGGTCAGTGCTCAGAAGTGAGTTGTTCTGATGGCTTGGAACAAGCCTCCTGCAGCAGTAGGGGGTTCTCTAGGAGTTTTGGGTCCATCAGACATGTGAATTTCTCACAAGCAATATTGGGGTCGAGATATCTCTCGGGAATTCAAGAAATACTTGCTCAAATTGCAAGGTATTCACTTGAGAATCTAGAACAGATTAATTGTTCAGGTGCTAGTAGGAGAGCCAGAGCAGAAGGAAATACATCAACCTCAACTTTCCCAATGACAGGGACAAATCACAGTGCAGATTCTATGCTTGAAGCTCATGCTGATTCTACAATGGAAAGACACGATTCAGCTGAATCAAAGAAATCCCAACTTCTGACTCTTCTTCAACTGGTGGACAGTCGATACAATCAGTGTTTGGATGAGATACACACGGTTGTGTCTGCATTTCATGCTGCTACAGAGTTGGACCCGCACGTTCATGCACATTTTGCTCTTCGAACAATCTCTTTGTTGTACAAGGATTTGCGAGAGAGGATCAGCAATTACATTCTTGCCATGGGAGCAAGTTTTAACAACTCATGCACAGAAGAAGAGAAGGAAAGGTCTGTGGAAGCTTCGTTCATTGAGAAGCAATGGGCTCTGCAGCAGTTGAAGAGAAAGGAGCATCAGTTATGGAGGCCACAGAGGGGCTTGCCAGAAAGATCTGTCTCAGTTCTTCGGGCTTGGATGTTTCAGAATTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTTGCAGTGAAAAGTGGGTTGACTAGAAGCCAGGTATCCAACTGGTTTATAAATGCTCGTGTGAGGCTATGGAAGCCTTTGATAGAGGAAATGTACGCAGAAATGAACAAAAGAAAGGCTATTCGAAATGAAGAAGGAACAGAGAGCAGTCATAGAAGCAGCAGGATAAGTATGAGCCATCAAACATTTAATATCAACTGA 1920 0.4354 MFLRRPAMNRSLNRENPNILIVMIAEKQIIGGGEEDKRDQRNGPSKACHRNEWLCTKEQCVALFPLSPTLLSLFLFPVTVLAQTRLPRTNSNSDHAVLDSVKVPLVKFMCFHLIAISMENEMFSAPMGEIPQHSTPNPLIQCYSFDLNDQTRIMNGISMLQGDLSLISNVQIDVPLINPACIPDSNSSVTSQAKNIVGDASLGTLNNNQFQDQLAEGTTITPASLAAILAARFALQEKSPALSPILEDLAPYILNNWQDTSNSNPLLPTFGEVLGTYSSLANPDPEAWTPSNAANLTHHAYDSPNFSNELSLRIATSPVGQCSEVSCSDGLEQASCSSRGFSRSFGSIRHVNFSQAILGSRYLSGIQEILAQIARYSLENLEQINCSGASRRARAEGNTSTSTFPMTGTNHSADSMLEAHADSTMERHDSAESKKSQLLTLLQLVDSRYNQCLDEIHTVVSAFHAATELDPHVHAHFALRTISLLYKDLRERISNYILAMGASFNNSCTEEEKERSVEASFIEKQWALQQLKRKEHQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNKRKAIRNEEGTESSHRSSRISMSHQTFNIN 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0085 639 ProSiteProfiles 'Homeobox' domain profile. 536 599 IPR001356 GO:0003677
Bisa05g0085 639 Pfam Associated with HOX 357 494 IPR006563 -
Bisa05g0085 639 CDD homeodomain 539 599 IPR001356 GO:0003677
Bisa05g0085 639 MobiDBLite consensus disorder prediction 615 639 - -
Bisa05g0085 639 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 289 621 - -
Bisa05g0085 639 Gene3D - 542 621 - -
Bisa05g0085 639 Pfam Homeobox KN domain 556 595 IPR008422 GO:0003677|GO:0006355
Bisa05g0085 639 SUPERFAMILY Homeodomain-like 541 608 IPR009057 -
Bisa05g0085 639 SMART prehox3 351 495 IPR006563 -
Bisa05g0085 639 SMART HOX_1 539 603 IPR001356 GO:0003677
Bisa05g0085 639 MobiDBLite consensus disorder prediction 625 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0085 Bisa-ChrBisa05 1265630 1268718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0085 308 612 Homeobox Transcription Factor Family AT4G32980 56.634 1.15e-108 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa05g0085 POX 3e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0085 05 1265630 1268718 Bisa05g0085 05 1265630 1268718 ECH