Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0083 ATGGGCAGAAAGTGCTCCTACTGTGGAAACTTGGGTCACAATTCAAGGACTTGTAATACTCAGAGAGGTAGCTTTGGTGGTGGGTTAAAGATCTTTGGAGTACAACTTGACCCTCCTTCCTCTTCTTCTTCTTGTCCTTCACCTTCGTGTAGTTTTCCCCTGAAGAGAAGTTTCAGCCTGGACTGCTTCCCAACTCACAATTCTGATCACAATAAAATGTCTGATGGTTACTCAGCCAGTGACCTCATTACAAGAACCCAAGAAAGGAAAAAAGGTGTGCCATGGACGGAGGAGGAACACCAGATATTTCTGATGGGGCTGAAGAAGCTGGGGAGGGGTGACTGGAGAGGCATCTCTAAGAATTTTGTGACAACAAGAACACCAACCCAAGTGGCCAGTCATGCGCAGAAATATTTCCTGCGTCTCAATAACTTCAATAAAAGAAAACGTTATCGTGCCATTCTTGATGCGGAAGGAGAAAGCATGAGAGGTGAAGAAGCATTCATGAGTTCTTGCTTTAATTCCAAGCCAATTGAAGGTGTTGGATTATTCCAATATGAGACTACAGGAGATTGCAGCAAAACTATTTGTCTTCCTCGGTGGCTTTCGAGTCATCATTCTCTGCTCAATTGGTCTGCCTCTTCAGCAACGTACAGTACTCTTCGAGGCGTAGAACCTGATTTAGAACTCAAACTTGGAGCTTCCACGCCATTGGAGCTTCGCAGGCCTTCAATAAGTTGA 741 0.448 MGRKCSYCGNLGHNSRTCNTQRGSFGGGLKIFGVQLDPPSSSSSCPSPSCSFPLKRSFSLDCFPTHNSDHNKMSDGYSASDLITRTQERKKGVPWTEEEHQIFLMGLKKLGRGDWRGISKNFVTTRTPTQVASHAQKYFLRLNNFNKRKRYRAILDAEGESMRGEEAFMSSCFNSKPIEGVGLFQYETTGDCSKTICLPRWLSSHHSLLNWSASSATYSTLRGVEPDLELKLGASTPLELRRPSIS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0083 246 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Bisa05g0083 246 SUPERFAMILY Homeodomain-like 88 144 IPR009057 -
Bisa05g0083 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Bisa05g0083 246 PANTHER TRANSCRIPTION FACTOR KUA1 3 162 - -
Bisa05g0083 246 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Bisa05g0083 246 FunFam transcription factor MYB1R1 93 144 - -
Bisa05g0083 246 CDD SANT 94 139 IPR001005 -
Bisa05g0083 246 ProSiteProfiles SANT domain profile. 95 143 IPR017884 -
Bisa05g0083 246 SMART sant 91 141 IPR001005 -
Bisa05g0083 246 Gene3D - 93 145 - -
Bisa05g0083 246 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0083 Bisa-ChrBisa05 1243537 1244467 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa05g0083 Myb_DNA-binding 2.6e-12 CL0123