Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0074 ATGGGAGAGGACCAAAACTGGCTGGAGATAGGGTTTTGTCATACTGGAGGTCGACTAGATGAAGTGGTATTGCATGTTGGATCAAGCAGTGACGGAATTCGAAATTCATCGTTCATTTCACCTGAGCCAGTAAAGGATGATCCAAGCAACTTGTGTGGCCACGATTCATCTGTGATCGGTGAAACGGAGGAGGAAGAAAGGAGAAGCGGGTACGAGTCTCCAAAATGGATGTCTTCGAAGATGAGGCTGATGCGAAAAATGATGAGACCCAACCACAACCCCAATACTGGCGTCACTCATAGACCGTCCAACGTTACAGCTCCAACATTAAACCAAAATGATGAGCACGAAAACAGGCAAGCAAGCCCTCATATTCCCATTAACCACAGAAATAGCACCACTAGGGTTTGCGCAGATTGTAACACAACCAGCACCCCACTCTGGAGGGGTGGCCCTAAGGGTCCTAAGTCACTATGCAATGCGTGTGGAATCAGGCAGAGGAAGGCAAGAAGGGCGTTAATGGCAGAAGCTGCAAATGGGGATGCTACGTCGTCCACGAAGACGATGTCGTTCAGCAGAGTTCAGAACAAGGAAAAGAAGCGTCGCACAGCCCATCTGTTACAGTTGAAGAATAAGAGCAAGAGCACGAGCACTGCACGTGCCGCCACATCTCATGATCACCCTGAGCCACACACCAACAGTTTTGGATTGGTTGACCGGTTGCAAGTGTTCCCAAGAGACGAAGTGGCTCAGGCGGCGCTGCTTCTCATGGACCTATCTTGTGCCTTCCTTCCCATTTAG 801 0.4969 MGEDQNWLEIGFCHTGGRLDEVVLHVGSSSDGIRNSSFISPEPVKDDPSNLCGHDSSVIGETEEEERRSGYESPKWMSSKMRLMRKMMRPNHNPNTGVTHRPSNVTAPTLNQNDEHENRQASPHIPINHRNSTTRVCADCNTTSTPLWRGGPKGPKSLCNACGIRQRKARRALMAEAANGDATSSTKTMSFSRVQNKEKKRRTAHLLQLKNKSKSTSTARAATSHDHPEPHTNSFGLVDRLQVFPRDEVAQAALLLMDLSCAFLPI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0074 266 Pfam GATA zinc finger 137 170 IPR000679 GO:0006355|GO:0043565
Bisa05g0074 266 MobiDBLite consensus disorder prediction 93 129 - -
Bisa05g0074 266 FunFam GATA transcription factor 21 131 211 - -
Bisa05g0074 266 MobiDBLite consensus disorder prediction 93 116 - -
Bisa05g0074 266 ProSitePatterns GATA-type zinc finger domain. 137 162 IPR000679 GO:0006355|GO:0043565
Bisa05g0074 266 MobiDBLite consensus disorder prediction 209 223 - -
Bisa05g0074 266 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 46 263 - -
Bisa05g0074 266 MobiDBLite consensus disorder prediction 34 74 - -
Bisa05g0074 266 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 130 172 - -
Bisa05g0074 266 CDD ZnF_GATA 136 168 IPR000679 GO:0006355|GO:0043565
Bisa05g0074 266 ProSiteProfiles GATA-type zinc finger domain profile. 131 167 IPR000679 GO:0006355|GO:0043565
Bisa05g0074 266 SMART GATA_3 131 183 IPR000679 GO:0006355|GO:0043565
Bisa05g0074 266 MobiDBLite consensus disorder prediction 177 234 - -
Bisa05g0074 266 MobiDBLite consensus disorder prediction 58 73 - -
Bisa05g0074 266 Gene3D - 131 225 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0074 Bisa-ChrBisa05 1154945 1157238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0074 69 166 C2C2-Gata Transcription Factor Family AT4G26150 43.878 4.61e-19 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa05g0074 GATA 5.5e-16 CL0167