Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0069 ATGGCGTCGTCGTCGACATCCACGTGTTCGAAGAGGCACCCGGTGTACCGGGGAATCCGGAGCCGGGGCGGGAAGTGGGTGTTGGAGATCCAGGAGCCACGTAAAGCGTCGCGGATATGGCTAGGGACGTTTGCCACGGCGGAGATGGCGGCGGCCGCCTATGACGTGGCGGCTCTGGAGCTGAAAGGCAAGGAAGCCGTTCTCAACTGGCCGGACTCCGTCGGGAGGTACCCGGTGCCTCTGTCCACCTCTCCTTCTCACATTCGAAGTGCTGCCTCTGCCGCTGCTTTGCTCTTCAGCGCTGAATCTAATAATTACAATTGCGATTCTGATTGTACCCGTAATGCTGGTTTGGTAATGAAGCTGATAATGACAATGATGTGTCAGTGCCGTCGGGGTGGTGCGAGATAG 411 0.5791 MASSSTSTCSKRHPVYRGIRSRGGKWVLEIQEPRKASRIWLGTFATAEMAAAAYDVAALELKGKEAVLNWPDSVGRYPVPLSTSPSHIRSAASAAALLFSAESNNYNCDSDCTRNAGLVMKLIMTMMCQCRRGGAR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0069 136 Gene3D AP2/ERF domain 15 72 IPR036955 GO:0003700|GO:0006355
Bisa05g0069 136 SUPERFAMILY DNA-binding domain 15 73 IPR016177 GO:0003677
Bisa05g0069 136 SMART rav1_2 15 77 IPR001471 GO:0003700|GO:0006355
Bisa05g0069 136 ProSiteProfiles AP2/ERF domain profile. 15 71 IPR001471 GO:0003700|GO:0006355
Bisa05g0069 136 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 103 - -
Bisa05g0069 136 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0069 Bisa-ChrBisa05 1043084 1043494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0069 12 103 AP2-EREBP Transcription Factor Family AT5G51990 58.065 1.09e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g0069 AP2 6e-09 CL0081