Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0046 ATGGAGGAGATGTCGTCCACAATTGCAGTGCCATTCAGTATAGGTAATTCAATCTGTGATACTGATAACCCAACCATAGCTACTCACATGGACGTATCCAGGCTTACGGTGATGGCAGATGGGGGTTCGTTAGTAAATTCTATGAGTAAGGTTTCGGAGACGGTTGCTGATTCTAATGGGGATCGTGATGGTGGTAATCTGCAGGATGAAGTTAGTTTTACAGCAGTCACACCACCAAAACAGGGTAAAGAAGGAGAAATTCTTTTGTCCGATATGATATCCGAAAATAAAACTACCTTGGATGCTGGCGCCGAAGCGTTAGGCCCTGAAATTGAGGAGGATGATTCCTTATCATTGGAAGGTGATCAGATTGTTGATAGCTCTTGTTCACTTTCAGTGGCCAGTGAGAACAGTAGCATTTGTGGAGAGGAAGCCGTTGGTTTTGATGCTACCTCAGAAGTAGGAGTATCAAGTTCCGTGGACATCGAGAAGAGCATCCGGAGTGTAAATATTGTAGCCAAAGCTGCTAATTTGGCTGAAAATGTTGAGGCGGAGGTTGTGAGTGAACCTCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGACTGGAGTTGGATCTGGTCCAAAGCCTTCTGCAGTTGTTCTTGAGCTGCCTGTGGAAAAAAAGGTGATTGGAGCAGCTGGTCGCAGTGTCTTTGAATTGGATTATGCTCCGCTTTGGGGATATATATCTATGTGCGGAAGAAGACCTGAGATGGAAGATGCAGTTGCAACTGTACCTCGATTTTTGAAGATTCCTATTCAAATGCTAATTGGGCATCGCGTTCTTGATGGAATGAGCAAGTGTTTTAGTCAGCAGACGATTCATTTCTTTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTAGCAAATTATTGCCGTGACCGTATTCATTTGGCTTTGGCTGAAGAAATAGAATTTGTTAAGGAAGGTTTAGTTAGTGGAAGTATCAAGGCTGATTGTCAAGATCAGTGGGAAAAAGCTTTCACCAATTGTTTTCTGAAGGTTGATGCTGAAGTTGGAGGAAACACGAATTGTGAACCTATTGCCCCAGAAACTGTTGGTTCCACTGCTGTTGTTGCTATTATTTGTTCGTCTCATATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTTCTGTGTCGTGGCAAAGAATCCATGCCATTGTCAGTGGATCATAAACCAAATCGAGATGATGAATTTGCAAGAATTGAGGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGCGTATTTGGGGTTCTTGCAATGTCAAGGTCTATTGGCGATAGGTATTTGAAGCCATGGATTATTCCAGAACCAGAGATCACGTTTATTCCACGTGCAAAAGATGATGAATGCCTCATTCTGGCCAGTGATGGTCTTTGGGATGTCATGACAAATGAAGAGGCATGCGACCTAGCACAGAGACGAATACTTCTCTGGCACAAGAAAAATGGCGTTGCACTACCCCCAGAACGAGGGTGGGGAATTGATCCAGCTGCACAAGCAGCTGCAGAGTACCTGTCAAACCGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATCGTGGTGGATTTGAAAGCTCACAGAAAATTTAAAAGCAAAACGTGA 1659 0.4412 MEEMSSTIAVPFSIGNSICDTDNPTIATHMDVSRLTVMADGGSLVNSMSKVSETVADSNGDRDGGNLQDEVSFTAVTPPKQGKEGEILLSDMISENKTTLDAGAEALGPEIEEDDSLSLEGDQIVDSSCSLSVASENSSICGEEAVGFDATSEVGVSSSVDIEKSIRSVNIVAKAANLAENVEAEVVSEPLAVAVSLEEETGVGSGPKPSAVVLELPVEKKVIGAAGRSVFELDYAPLWGYISMCGRRPEMEDAVATVPRFLKIPIQMLIGHRVLDGMSKCFSQQTIHFFGVYDGHGGSQVANYCRDRIHLALAEEIEFVKEGLVSGSIKADCQDQWEKAFTNCFLKVDAEVGGNTNCEPIAPETVGSTAVVAIICSSHIIVANCGDSRAVLCRGKESMPLSVDHKPNRDDEFARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEITFIPRAKDDECLILASDGLWDVMTNEEACDLAQRRILLWHKKNGVALPPERGWGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAHRKFKSKT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0046 552 SMART PP2C_4 228 540 IPR001932 -
Bisa05g0046 552 SUPERFAMILY PP2C-like 235 543 IPR036457 -
Bisa05g0046 552 Pfam Protein phosphatase 2C 265 535 IPR001932 -
Bisa05g0046 552 CDD PP2Cc 240 542 IPR001932 -
Bisa05g0046 552 FunFam Protein phosphatase 2C 16 226 552 - -
Bisa05g0046 552 ProSitePatterns PPM-type phosphatase domain signature. 289 297 IPR000222 GO:0043169
Bisa05g0046 552 PANTHER PROTEIN PHOSPHATASE 178 542 IPR015655 GO:0004722|GO:0006470
Bisa05g0046 552 Gene3D - 225 552 IPR036457 -
Bisa05g0046 552 ProSiteProfiles PPM-type phosphatase domain profile. 238 542 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0046 Bisa-ChrBisa05 825951 828595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0046 1 552 PP2C-type Phosphatase Gene Family AT1G17550 47.880 7.07e-170 489