LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa05g0041	ATGACAGATAGTAATTCAAAACCACCAGATTCACCGGAGAGCGAGTTCACCAACCAGAATTCGTTTGAATTCTCTGAGTTCTTCAAGTTCGATGATGATGAATGGCCAGATTCATCTTTGGTTCCTGAGCAAGTCCCAAACCAGCTGTTCTATCAAACCAATGAAGTAAGTGGCGTTAACGTTGTTGGAGGAAGTACTGCCAACCACCTTGAGGGGTCTTCTAGCAGAGACATTAGCAGTAGTACCAGTGGCGAAAAGAAGGAGGCGAAAGATAGAGTTGCATTCAAAACACAGTCAGAGGTTGAGATACTGGATGATGGGTACAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCCAATCCCAGGAATTACTATAAATGTTCAGTGGACGGATGCCCAGTGAAAAAGAGAGTTGAGAGAGACAGGGATGATCCAAGGTATGTAATAACAACCTACGAAGGCATCCACACCCACCCAAGTTCTAGCTAG	498	0.4498	MTDSNSKPPDSPESEFTNQNSFEFSEFFKFDDDEWPDSSLVPEQVPNQLFYQTNEVSGVNVVGGSTANHLEGSSSRDISSSTSGEKKEAKDRVAFKTQSEVEILDDGYKWRKYGKKMVKNSPNPRNYYKCSVDGCPVKKRVERDRDDPRYVITTYEGIHTHPSSS	165

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa05g0041	165	MobiDBLite	consensus disorder prediction	62	80	-	-
	Bisa05g0041	165	SUPERFAMILY	WRKY DNA-binding domain	97	163	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa05g0041	165	MobiDBLite	consensus disorder prediction	62	91	-	-
	Bisa05g0041	165	Gene3D	WRKY domain	91	157	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa05g0041	165	SMART	WRKY_cls	104	163	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa05g0041	165	Pfam	WRKY DNA -binding domain	105	162	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa05g0041	165	ProSiteProfiles	WRKY domain profile.	99	164	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa05g0041	165	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	33	163	IPR044810	GO:0003700
	Bisa05g0041	165	FunFam	WRKY transcription factor 57	90	164	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa05g0041	Bisa-ChrBisa05	796064	797174	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa05g0041	22	163	WRKY Transcription Factor Family	AT5G26170	55.844	1.19e-49	156

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa05g0041		WRKY	6.1e-25	CL0274