Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0037 ATGGACGGAGGTGCTCCGTACAACCCTCGTACGGTCGAGGAGGTCTTTAGGGATTTCAAGGGTCGCCGAGCTGGCATGATTAAGGCTCTCACTACCGATGTTGAAGAGTTCTATCAGCAGTGTGATCCGGAGAAGGAAAACCTTTGCCTTTATGGATTTCCTAGTGAACAGTGGGAAGTCAATCTGCCTGCCGAGGAGGTACCTCCAGAGCTTCCAGAACCAGCATTGGGTATTAACTTTGCTAGAGACGGGATGCAAGAAAAAGACTGGTTATCTTTGGTTGCTGTTCACAGTGATGCATGGTTACTTGCTGTAGCCTTTTATTTTGGTGCTAGATTTGGATTTGATAAGGCTGATAGGAAGCGACTATTTAATATGATAAATGATCTTCCAACTATATTTGAGGTTGTAACAGGGATGGCCAAGAAACAAGGAAAGGAGAAGTCATCAGTTTCTAATCATAGCAGCAACAAATCCAAATCAAACCCCAAGCAGAAAGGATCTGAATCTCAGGGAAAGTATTCAAAGGCAATGCAATCAAAGGATGAAGATGAGGAGGGTTTAGAAGATGAAGATGAAGAAGAGCATGGAGAGACACTATGCGGGGCATGTGGAGAGAACTATGCATCTGATGAGTTCTGGATTTGCTGTGACATCTGTGAGAAGTGGTTTCACGGGAAATGTGTGAAGATCACCCCCGCAAGGGCTGAGCATATCAAGCACTATAAATGTCCATCCTGTAGCAACAAGAGAGCTCGACCTTGA 765 0.4484 MDGGAPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGKEKSSVSNHSSNKSKSNPKQKGSESQGKYSKAMQSKDEDEEGLEDEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPSCSNKRARP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0037 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 249 IPR013083 -
Bisa05g0037 254 PANTHER CPG BINDING PROTEIN 8 253 IPR045104 GO:0006355|GO:0042393
Bisa05g0037 254 MobiDBLite consensus disorder prediction 145 194 - -
Bisa05g0037 254 MobiDBLite consensus disorder prediction 150 175 - -
Bisa05g0037 254 ProSitePatterns Zinc finger PHD-type signature. 201 247 IPR019786 -
Bisa05g0037 254 ProSiteProfiles Zinc finger PHD-type profile. 198 250 IPR019787 -
Bisa05g0037 254 SMART PHD_3 200 248 IPR001965 -
Bisa05g0037 254 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Bisa05g0037 254 CDD PHD_AL_plant 200 250 IPR044104 -
Bisa05g0037 254 Pfam PHD-finger 201 250 IPR019787 -
Bisa05g0037 254 SUPERFAMILY FYVE/PHD zinc finger 190 251 IPR011011 -
Bisa05g0037 254 FunFam PHD finger alfin-like protein 193 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0037 Bisa-ChrBisa05 766355 771818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0037 1 253 Alfin-like Transcription Factor Family AT3G42790 77.165 1.64e-128 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Bisa05g0037 Alfin 5e-70 No_clan