Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0036 ATGAAATTAAGTGATTTCAGTGACTACTTTCATCTTCTTATAAATGATGTAGCAAAGAAAGTAAACTTATCAGTTGTTAAGAAAATATGCCGTAAAGAAGGATTAGCTCGATGGCCTCATAGAAATATTCCTCCTCCTTCTTATCCCAGAGCCACGCATATACGCAACCCCTCCACTCCCACAACGCCCCTCTGTGGCGGCGCTTTCACTTCGGCGTTGCTACAACATCATCATCATCATCCCTTGAAGCAATATTTAAGCATAGCAGAGAGGAGAAATCAGGCCTTTGGTTGGGTGACTAACGTATGTATGGGGAACCCCATGTCGTTAGTTCCATACTATAACCCCTACGATTTATCACTCTCCCAAATCATTCTCAATTATCAAAATCCCACATTTGCCAATCTACCCATTCAGCACTACTCTTCTTCACTCCCCCAACCAAATCATGTTGTTCTACCCGACAGTGACCATGATCTGTATTCAGGTCAAATCATTCCAGATATAGATATTATGGCGCACAATTTTTCCCATGAAGCAGTTCCATCCCATCTCTACGCAGAAACTACTCATCCACCTCATCACAATTGGTGTTTTCAGAATCTCCCTGAAGTGGTCAACCTTTCGACCTGGCCAGAACATCCTTTACCTTTTATTTGTAGTTGCTGCCAAGTCCTGCGAGAAATAGTTCATACTAATGGGATTAAGTTCACAAAACTGGAGATTCATGGAAGGCTGGGTATGATCTGTCATGCAATTCAACAACAGGATATCAGTGTGCATTCTTCTGACGATCACCGTCAAATTCAAATGATTGATTTTTGCCGCAAAAACATAGAAGAAATCAAGAATTTTCTGATGCAGTATTGCATGGAGCAAAATTCAGCGGGGTACTTCGTTGTGCAAGATCCGCTTTCAGTATATTATGAAGCCCTTTGCATTGGACTAGACTGGACTGAAGATATAAACGATGAATTCCTTGATCAAAATCTTGACAATTCTGGGGTAACATCTGATGAGGCCGAGGATATGGAAAGGACTCCAAGGACTTGCCTTGCAGCACAGAGGGAGAGAGCAGCGAAAATGAAATTAAGTGACTTCAGTGACTACTTTCATCTTCCTATAGACGATGCAGCAAAGGAAGTAAATTTATGTCCCACAGTTGTTAAGAAAATATGTCGTAAAGAAGGATTAGCCCGATGGCCTCATAGAAAGATAAAGAGCATAGTGAAGAAGATAAAGATATTGAGAGGGACTTTAAACTCCAGAGATGCAGCGTCAAGGGCGCAAACTCAAGGAGAAATAGAAAGACTTCATCAAGAAATGATTCAGCACTGTGGTGGAATCGCCCCAACTTCATTAAATTTGGATACTTGA 1377 0.4132 MKLSDFSDYFHLLINDVAKKVNLSVVKKICRKEGLARWPHRNIPPPSYPRATHIRNPSTPTTPLCGGAFTSALLQHHHHHPLKQYLSIAERRNQAFGWVTNVCMGNPMSLVPYYNPYDLSLSQIILNYQNPTFANLPIQHYSSSLPQPNHVVLPDSDHDLYSGQIIPDIDIMAHNFSHEAVPSHLYAETTHPPHHNWCFQNLPEVVNLSTWPEHPLPFICSCCQVLREIVHTNGIKFTKLEIHGRLGMICHAIQQQDISVHSSDDHRQIQMIDFCRKNIEEIKNFLMQYCMEQNSAGYFVVQDPLSVYYEALCIGLDWTEDINDEFLDQNLDNSGVTSDEAEDMERTPRTCLAAQRERAAKMKLSDFSDYFHLPIDDAAKEVNLCPTVVKKICRKEGLARWPHRKIKSIVKKIKILRGTLNSRDAASRAQTQGEIERLHQEMIQHCGGIAPTSLNLDT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0036 458 PANTHER PROTEIN RKD4 2 41 IPR044607 GO:0003700
Bisa05g0036 458 Pfam RWP-RK domain 1 43 IPR003035 -
Bisa05g0036 458 Pfam RWP-RK domain 362 409 IPR003035 -
Bisa05g0036 458 ProSiteProfiles RWP-RK domain profile. 1 68 IPR003035 -
Bisa05g0036 458 ProSiteProfiles RWP-RK domain profile. 349 429 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0036 Bisa-ChrBisa05 758839 762132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0036 322 426 NLP Transcription Factor Family AT1G64530 31.481 2.72e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bisa05g0036 RWP-RK 4e-20 No_clan