Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0032 ATGAATCACAGAGACGGCCCTGAAACTCGCCACAGCAGCAACATGGGCTCCCCAAAACTATCTCGCCAATCATCCAAATCCAATAGTAAGCCCAAGCATATAGCGGAGGCACTCAGCCCTATTCCTCATGGATGTTGCCGAGGTTTCAGTAACGTCAAGACCATGGGACCCACTGTTTCCGCTATCCAACACCAGCACCACCTCCAACATTCTAAAGCACTGGAACTCAAGGTGGCAGATCTGGAAAAACAAGTGGAGAAGCAGACAGAACTGCGAATAATGTACAGGAAGAGGATGGAGAGGACGCAGGACTATCTGAGATATTGCCTTCAAATAGCACAAGACAATGGCATAATGGACCTCATCCTCCGCTGCAAAGGTGACCTCCAACAATCCCCTCTCTCTATCGACACCCCCAGCCCTCGCATTAATCCCACTACTCCCCCCCAACACTCTCATCTCGCACTCATCGCCGATCAAGCCAAACTCAATGGATGGTATATTGATCCAGCCGAGATTGAATTGGAAGGGAAAATAGGGGAGGGAAGCACGGCGGACATATACAGGGCGACGTGGCGGGGATATGATGTGGCGGTGAAGTGCATAACGGCTGAGTTTTTCCGAACAAACGAGAACGGCGTCGTATTCTTCGCTCAGGAGATCGAGACTCTGTCTCGGCAGAGGCACCGGTTCGTGCTGCAGCTGATGGGGGCGTGCCTGGAGCCGCCCCAGCGCGCGTGGGTGGTGACAGAGCATCTGAGCACCACGCTCCGGGAATGGCTCCACGGGGGCGGGGGCAGGTCCCGGAGGCGAGAGAGGTCGGTGCCGCTTGCTCCCCTGAGAGAGAGGGTGAGGATGGCGCTTGAGATAGGGCAGGGGATGCAGTACCTGCACGAACAAAAGCCCAAGGTCATCCACCGCGACCTCAAGCCCAGCAACATCTTCTTGGACGACGCCTTCCATGTCAGAATCGCTGACTTTGGTCATGCTCGCTTCCTCCATGACCACGAAATGGCTCTCACCGGTGAAACAGGGACGTATGTGTACATGGCCCCAGAAGTGATAAGATGCGAGCCTTATAATGAAAAATGTGATGTGTACAGTTTTGGAGTGATATTCAACGAGCTTCTCACTGGAAACTACCCTTTCATTGAGACCGACTACGGCCCTGCCAAGATTGCAATGGAAGTAGTGGAGGGAAAGCTGAGGCCGGCGGTTGCAGAGGATGAGGATGGAAAAATAGGGGAGCTCACTCAACTCATCGCCCTTTGTTGGGATGGAGATCCATCAATCAGACCACCCTTTGCAGCAATCACTCGCACCCTCAGAGCCTACTTAAACAAACCCAACCCTCTTTAA 1359 0.535 MNHRDGPETRHSSNMGSPKLSRQSSKSNSKPKHIAEALSPIPHGCCRGFSNVKTMGPTVSAIQHQHHLQHSKALELKVADLEKQVEKQTELRIMYRKRMERTQDYLRYCLQIAQDNGIMDLILRCKGDLQQSPLSIDTPSPRINPTTPPQHSHLALIADQAKLNGWYIDPAEIELEGKIGEGSTADIYRATWRGYDVAVKCITAEFFRTNENGVVFFAQEIETLSRQRHRFVLQLMGACLEPPQRAWVVTEHLSTTLREWLHGGGGRSRRRERSVPLAPLRERVRMALEIGQGMQYLHEQKPKVIHRDLKPSNIFLDDAFHVRIADFGHARFLHDHEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVIFNELLTGNYPFIETDYGPAKIAMEVVEGKLRPAVAEDEDGKIGELTQLIALCWDGDPSIRPPFAAITRTLRAYLNKPNPL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0032 452 Coils Coil 71 91 - -
Bisa05g0032 452 MobiDBLite consensus disorder prediction 1 33 - -
Bisa05g0032 452 CDD STKc_MAP3K-like 179 442 - -
Bisa05g0032 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Bisa05g0032 452 SMART serkin_6 173 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0032 452 Gene3D Transferase(Phosphotransferase) domain 1 254 448 - -
Bisa05g0032 452 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 84 443 - -
Bisa05g0032 452 SUPERFAMILY Protein kinase-like (PK-like) 148 440 IPR011009 -
Bisa05g0032 452 Gene3D Phosphorylase Kinase; domain 1 161 253 - -
Bisa05g0032 452 ProSiteProfiles Protein kinase domain profile. 173 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0032 452 ProSitePatterns Protein kinases ATP-binding region signature. 179 200 IPR017441 GO:0005524
Bisa05g0032 452 MobiDBLite consensus disorder prediction 11 32 - -
Bisa05g0032 452 Pfam Protein kinase domain 175 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0032 Bisa-ChrBisa05 670513 672680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0032 166 442 MAP Kinase Kinase Kinase AT4G35780 35.252 6.86e-50 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Bisa05g0032 Pkinase 1.9e-45 CL0016