Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0029 ATGGGTTGGGGTCACCTGGGAAGAAATGGGCACTCCAACTCGACTGACCCTGACACCAGTGCGGAGGCAGGTCCAACCACCACCACCGGCACGGAACAAACCTTACCACGGCGGTTCCCCCTGGCGGCTCAGCCGGAGATCATGAGAGCTGCTGAGAAAGATGATCAGTATGCCTCGTTCGTCTATGAAGCCTGTCGCGACGCCTTCCGCCACCTCTTTGGTGCCAGAGTTGCTATTACCTACCAAAGTGAGACAAGACTTTTGGGACAGATGCTTTACTATGTCCTGACCACAGGTTCGGGACAACAGACGCTAGGGGAGGAATACTGTGACATCACTCAGGTTGGAGGACCCTATGGACTTTCTCCTACTCCTGCAAGGCGTGCTCTTTTTATTGTATACCAGACAGCTGTTCCATATATTGCAGAACGAATTAGTTCCAGAATTGCTTCCCGTGGAATTGCCCTTGCTGATTCACAATCTGCTGAGATCTATGGAGAAAATTCCATCAGGAGCAGTGAACTCCAAAATTCTGCTATGAGTGAACTTCCCTCTTCTTCCACATCAGGGCAATCTGTTACAACTCTGACAAGGTTGAAGGAGAGATTGGAAGGACTTTGGTTGCATGTAGTTCAGAGATGGCCTATGATGCTTCCCATGGTTCGTGAGATGTTGCAACTGGTTCTTCGTGCTAATCTCATGTTCTTCTATTTCGAAGGTCTCTATTATCATATATCAAAACGTGCCGCAGGTATTCTGTATGTGTTCATTGGAAAAGCATCAAATCAAAGGCCCAGATACCAAATTCTGGGAGTATTTCTGTTGATTCAACTTTGTATAATTGCTGCTGAAGGGCTACGTCGAAGCAATTTATCTTCAATTGCAAGTTCAGTTCAGCAGGCATCCCTTGGGAACCACCAGCGATCAGGAGGACGAGGTTTGCCTATTTTAAATGAAGAAGGTATTCTGGCATCATCTGATACTGACAAAGGAACTTGGTTGTCTGACGCTTCACATTCTGAGTCCCAAGCAAATAGTGGAGTCAGCAAATGCACACTCTGCCTAAGTAATCGGCAACACCCAACAGCTACTTCCTGTGGCCATGTATTTTGCTGGAACTGTATAACGGAATGGTGCAACGAAAAGCCAGAATGCCCTCTTTGCCGCACCCCCTTAACACACTCAAGTCTAGTTTGTTTGTATCATTCAGACTTCTAG 1218 0.4704 MGWGHLGRNGHSNSTDPDTSAEAGPTTTTGTEQTLPRRFPLAAQPEIMRAAEKDDQYASFVYEACRDAFRHLFGARVAITYQSETRLLGQMLYYVLTTGSGQQTLGEEYCDITQVGGPYGLSPTPARRALFIVYQTAVPYIAERISSRIASRGIALADSQSAEIYGENSIRSSELQNSAMSELPSSSTSGQSVTTLTRLKERLEGLWLHVVQRWPMMLPMVREMLQLVLRANLMFFYFEGLYYHISKRAAGILYVFIGKASNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVQQASLGNHQRSGGRGLPILNEEGILASSDTDKGTWLSDASHSESQANSGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECPLCRTPLTHSSLVCLYHSDF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0029 405 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 40 403 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Bisa05g0029 405 MobiDBLite consensus disorder prediction 1 39 - -
Bisa05g0029 405 Coils Coil 402 405 - -
Bisa05g0029 405 SMART ring_2 351 388 IPR001841 -
Bisa05g0029 405 CDD RING-HC_PEX10 349 400 - -
Bisa05g0029 405 FunFam Peroxisome biogenesis factor 10 326 402 - -
Bisa05g0029 405 MobiDBLite consensus disorder prediction 8 35 - -
Bisa05g0029 405 ProSitePatterns Zinc finger RING-type signature. 366 375 IPR017907 -
Bisa05g0029 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 402 IPR013083 -
Bisa05g0029 405 ProSiteProfiles Zinc finger RING-type profile. 351 389 IPR001841 -
Bisa05g0029 405 Pfam Ring finger domain 350 389 IPR001841 -
Bisa05g0029 405 Pfam Pex2 / Pex12 amino terminal region 54 288 IPR006845 -
Bisa05g0029 405 SUPERFAMILY RING/U-box 350 394 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0029 343 401 C3H Transcription Factor Family AT4G27470 40.000 4.09e-10 58.2