Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0028 ATGGCGACATCGCTAAAGGATGGGAGGAGATTTGTTGTTCCTGTATCTAATTTTGGGATCACAGAGGAGTGTTCCGATTGCTCTAATCAAAGTGATGGAGAGGAAGAGGAAGAGGAAGACAAGCTACTCATTTCCCACATCAAGGCCCAGAAAACTGGGGGACAGGGCTCCCTAAAAGAGCTGGTCAATGCTCTCTTTTACCTCTGCTTCAGTTCCAATGTTATGTTCTTTCCCATTCCCACGGTGAAGACTAACTCGTTATTAGCCTCCACAAAAACTACTGGCTTGAATAGGAGTGGCAAGAGCTGTAGGCTCAGATGGTTGAATTATCTCAGGCCTGACATTAAAAGAGGAAACATCACCCAAGATGAAGAAGAACTCATCATTAGGCTCCATAAACTTCTTGGTAATAGATGGTCTCTCATAGCTGGAAGGCTACCCGGGAGAACAGACAATGAAATCAAGAACTACTGGAATACTACTCTGGGAAAGAAACTCAGACCACAATCATGTCTAATGTCTGAAGAACATTCATCCAGCAGTGGACCACAAGTAATCCAAGCCAGGGCCACTAGGTGCAAGAACGTGGTTATCCTAGATCCTCCATGTCCTAAGGAAAAGGAAAAGGAAAACTTGCTAGCTTCAAGCCAGATGAGGATTAATGAAGTTCACCTAACCACCCAGTTCAAAAATGGAACTCACTGTTCACAGTCTCCAAAAGCTCGGGGTGTAGAGGAATATCACAATTCAGATGTGGATATGTTGAGTTGTAGAAGGAGTGTTGAGTTTCAAGAAGATGCAGCAGATTTTTGCAGAGACTTTAACCTTGATAGCAGCATGGGCATGGTGATGGATAGTCATTCTCATGCTGACCAGTCCCTGCCAATTGATGAACTTATGGTCAATTGCTGGAGCACATGTGAATCGTTGGACGTTAACGTCACTATGGATCTGGATTCATTGGCCCTCCTACTGGATTCTGGAAATTGGCCGTGA 996 0.4438 MATSLKDGRRFVVPVSNFGITEECSDCSNQSDGEEEEEEDKLLISHIKAQKTGGQGSLKELVNALFYLCFSSNVMFFPIPTVKTNSLLASTKTTGLNRSGKSCRLRWLNYLRPDIKRGNITQDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKLRPQSCLMSEEHSSSSGPQVIQARATRCKNVVILDPPCPKEKEKENLLASSQMRINEVHLTTQFKNGTHCSQSPKARGVEEYHNSDVDMLSCRRSVEFQEDAADFCRDFNLDSSMGMVMDSHSHADQSLPIDELMVNCWSTCESLDVNVTMDLDSLALLLDSGNWP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0028 331 Gene3D - 119 188 - -
Bisa05g0028 331 Gene3D - 36 116 - -
Bisa05g0028 331 ProSiteProfiles Myb-like domain profile. 112 162 IPR001005 -
Bisa05g0028 331 Pfam Myb-like DNA-binding domain 117 161 IPR001005 -
Bisa05g0028 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 166 IPR017930 -
Bisa05g0028 331 CDD SANT 121 162 IPR001005 -
Bisa05g0028 331 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 24 209 - -
Bisa05g0028 331 SMART sant 31 113 IPR001005 -
Bisa05g0028 331 SMART sant 116 164 IPR001005 -
Bisa05g0028 331 SUPERFAMILY Homeodomain-like 97 170 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0028 Bisa-ChrBisa05 639754 644024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0028 51 199 MYB Transcription Factor Family AT5G35550 50.327 2.58e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa05g0028 Myb_DNA-binding 4.7e-14 CL0123