Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0027 ATGGGGAGGAGCCCCAAGGGGTCCGAGGAGGCTGGACTCAACAGAGGAGCCTGGACTGCCCAGGAAGACCATTTGCTCAGTTCTTACGTAATGGCCCAGGGCGAGGGCAAATGGACACACGTCCCTAAAAGAGCTGGCTTGAACAGGAGTGGCAAAAGCTGTAGGCTTAGATGGTTGAATTATCTCAGGCCTGACATTAAAAGAGGTAACATCACCCAAGATGAACAAGAACTCATTATTAAGCTCCATAAGCTTCTCGGTAACAGATGGTCTCTCATAGCAGGAAGGCTCCCAGGCCGAACAGACAATGAAATTAAGAACTACTGGAATACCACTCTGGCAAAGAAGCTTAAACAGTCGTGCTCAATGTGTGAACAACATCCATCCAACAAATCAACACCAACTCAGTCTGAGGTCAGTGGATCACAAGTTATCAAAACCAAGGCCACTAGGTGCAAAAATGTGGTTATTCTAGATCCCCCTTATCCTAGGGAAAAGAAAGAGTACTCGCTAGCTTCAAACCAGATGGAGTTTGATGAAGCTGGCCTAATCCCCCAGTTCAGTGATCAATCTCAGCTGGGTTCACAATATCACACTCCACAACATCACATGAATAATTCAGATGTGAAGATGCTCATGAGTACTCTTGAAGAAAATGCAGCAGACTTTAACCTTGAGAGCAGCATGGGCATGATGAGGGATGATGAGGCACTGATTGAGGAACTTATGGTGAATTGGTGGAGCACAGACGACGAGGCCACTGTGGATCTGCAACATTCTGGGGACCCCCCACCCACAGTTCCTTTGTGCCATATCTTTAATTAA 825 0.4679 MGRSPKGSEEAGLNRGAWTAQEDHLLSSYVMAQGEGKWTHVPKRAGLNRSGKSCRLRWLNYLRPDIKRGNITQDEQELIIKLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLAKKLKQSCSMCEQHPSNKSTPTQSEVSGSQVIKTKATRCKNVVILDPPYPREKKEYSLASNQMEFDEAGLIPQFSDQSQLGSQYHTPQHHMNNSDVKMLMSTLEENAADFNLESSMGMMRDDEALIEELMVNWWSTDDEATVDLQHSGDPPPTVPLCHIFN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0027 274 Gene3D - 15 67 - -
Bisa05g0027 274 FunFam MYB-related transcription factor 14 67 - -
Bisa05g0027 274 Gene3D - 71 142 - -
Bisa05g0027 274 MobiDBLite consensus disorder prediction 125 144 - -
Bisa05g0027 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bisa05g0027 274 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa05g0027 274 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 206 - -
Bisa05g0027 274 CDD SANT 72 113 IPR001005 -
Bisa05g0027 274 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bisa05g0027 274 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bisa05g0027 274 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bisa05g0027 274 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bisa05g0027 274 CDD SANT 17 62 IPR001005 -
Bisa05g0027 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa05g0027 274 SMART sant 14 64 IPR001005 -
Bisa05g0027 274 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0027 Bisa-ChrBisa05 629590 630599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0027 1 189 MYB Transcription Factor Family AT4G38620 50.505 8.72e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g0027 Myb_DNA-binding 1.3e-15 CL0123