Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0025 ATGTTGCTCCAAGCAAGGACTGAACAGAGGAGCCTGGACCGCCATGGAAGACAGATTGCTCACCTCTTACATTCAGGCTCACGGCGAAGGCAGATGGAGAAACGTCCCCCACAGAGCTGATGGTCTCTCATAGCTGGAAGACTTCCCGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACTACTCTGGCCAAGAAGCTTAGACCCTCGTCCCCTGCAATGCCTCTGCACAATCCTCCAAGCGAGGCTAAGGTTCGACCTCAGGTAATTCAAACCAAGGCCAGTAGGTGCAGAAACGTGGTTATCCTACAACCCCAATATCCCAACCTCAACTGTCCACCTTCAAACCACACCAAGTTTGATGAAGCTCACCTAGCCCCCCAAGTCCAATCCCCAATTCAACCTACTGCTTCGCATTCTTCTCCAAAACCTCATGTTCACCCAGACCCAGAGGAAGAAGATGGCTTTCAAGAAACTCACAATTGGGATGTGAATTTGTTGACTTGTAATGCAGCAGATCTCTGCACAGACGTCTTCAACCTTGAAAACAGCGTGGCAATGGATGGCCCTGGAATTGACCAACTTATGGTCAATTGCTGGACCACACCAAGTGGATTCGAGGTCGACCACAATGGCACTATGGATCTGGATTCATTACTCCTCCTCTTAGATTCTGGGGATTGGCCTTAG 693 0.4964 MLLQARTEQRSLDRHGRQIAHLLHSGSRRRQMEKRPPQSXWSLIAGRLPGRTDNEIKNYWNTTLAKKLRPSSPAMPLHNPPSEAKVRPQVIQTKASRCRNVVILQPQYPNLNCPPSNHTKFDEAHLAPQVQSPIQPTASHSSPKPHVHPDPEEEDGFQETHNWDVNLLTCNAADLCTDVFNLENSVAMDGPGIDQLMVNCWTTPSGFEVDHNGTMDLDSLLLLLDSGDWP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0025 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 68 IPR017930 -
Bisa05g0025 230 MobiDBLite consensus disorder prediction 114 160 - -
Bisa05g0025 230 Gene3D - 13 94 - -
Bisa05g0025 230 ProSiteProfiles Myb-like domain profile. 32 64 IPR001005 -
Bisa05g0025 230 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 41 101 - -
Bisa05g0025 230 SUPERFAMILY Homeodomain-like 39 69 IPR009057 -
Bisa05g0025 230 MobiDBLite consensus disorder prediction 145 160 - -
Bisa05g0025 230 Pfam Myb-like DNA-binding domain 40 63 IPR001005 -
Bisa05g0025 230 CDD SANT 41 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0025 Bisa-ChrBisa05 567817 568891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0025 41 104 MYB Transcription Factor Family AT5G35550 50.746 2.04e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa05g0025 Myb_DNA-binding 8.4e-06 CL0123