Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0017 ATGACCCTCCTGAGGTCTAACGGGAGAGTAGTTATGGCATTTCGGTTTGGACTTGTGCTTCTGGCTTTTGTCGTTTGTTTGAATATCAATTCGGTGGTCTCGGACGATGGAGCAACATTGCTAGAGATAAAGAAGTCGTTCAGGGATGTAGATAATGTTCTGTACGACTGGACAGACTCGCCATCTTCCGATTATTGTGTCTGGAGAGGGGTCGCATGCGATAACGTCACATTCAATGTCGTTGCACTCAACCTTTCAAGCTTAAATCTTGACGGGGAAATCTCACCTGCAATAGGAAGGCTCAAGAGCTCGGTCTCCATTGACCTTAGGGGAAACCGTCTATCGGGCCAGATACCAGATGAGATTGGTGACTGTTCCTCTTTGAAGAACTTGGACTTGTCATTCAATGAGATACGAGGAGACATACCATTTTCAATTTCAAAGTTGAAACAACTGGAAAATCTCGTTTTGAAAAATAACCAATTGATAGGACCAATTCCTTCAACCTTGTCTCAGATTCCCAACTTGAAGATTCTAGACCTGGCACAAAACAATCTTAGCGGTGAAATACCAAGGCTTATATACTGGAACGAAGTTTTGCAATATCTTGGCTTGCGAGGGAACAATTTAGTGGGTTCGCTCTCTCCAGACATGTGCCAGTTGACTGGATTATGGTTTTTTGATGTAAGGAACAACAGCTTGACAGGCAGCATTCCCGAAAGTATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTGACTGGAAAGATTCCGTTCAATATTGGGTTTCTTCAAGTAGCAACATTATCATTGCAAGGCAATAAACTCTCTGGGCATATTCCATCGGTGATAGGGCTGATGCAAGCACTTGCTGTATTAGATTTGAGCTGTAACATGTTAAGTGGACCAATCCCTCCTATCTTGGGAAATTTGACGTACACAGAAAAATTGTATTTACATGGAAATAAGCTGACTGGCCCCATCCCCCCGGAGCTTGGAAATATGACAAAACTCCACTATCTGGAACTTAATGATAACCATTTGAGTGGGTATATCCCACCTGAGCTTGGAAAGCTAACGGATCTCTTTGATTTAAATGTTGCTAACAACAATCTTGAGGGCCCAATTCCTGATAATATTAGCTCATGCAAAAACCTCAACAGCCTCAATGTGCATGGAAACAAGTTGAACGGAACAATCCCACCAACTTTTCAGACCTTGGAGAGTATGACATATCTGAATCTTTCCTCTAACAATCTTCAAGGCTTCATTCCAATTGAGCTGTCACGGATTGGTAATTTGGATACATTGGATATTTCAAATAATAATATAAGTGGATCGATACCTTCTTCACTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAATCATCTAACTGGGTTTGTTCCAGCAGAGTTTGGTAACCTAAGAAGTGTTATGGATATAGATCTTTCAAATAATCAGCTCTCTGGCTTGATTCCAGAAGAACTTAGTCAGCTTCAGAACATGATATCCTTGAGACTGGAAAACAATAAACTATCTGGGGATGTGACATCACTTATAAATTGCCTCAGTCTTTCTTTACTTAATGTGTCCTATAACAACCTAGTTGGTGTTATTCCAACTAGCAATAACTTTACCAGGTTTTCCCCTGACAGTTTCATTGGAAACCCTGGTCTTTGTGGCTATTGGATGACTTTGCCTTGTCATGGATCTCATCCCACTGAACGAGTTACGATATCTAAGGCAGCTATCCTAGGAATTGCTCTTGGTGCCCTTGTGATTCTACTTATGATATTACTGGCAGCTTGTCGGCCATACAATCCATCCCCCTTTCCTGATGGATCACTTGACAAACCAGTTAACTACTCACCACCAAAGCTAGTGATTCTTCATATGAATATGGCACTTCATGTGTACGAGGATATCATGAGGATGACTGAAAACCTGAGTGAGAAGTATATAATTGGATATGGTGCATCAAGCACAGTATACAAATGTGTTCTCAAGAATTGCAAGCCAGTGGCTATCAAGAGGCTTTATTCTCGCTATCCCCAAAGCTTTAAAGAATTTGAAACAGAACTTGAGACGGTTGGTAGCATCAAGCACAGAAATTTGGTGAGTCTCCAAGGTTACTCCCTGTCCCCTTACCACCTTCTCTTCTATGACTACATGGAAAATGGTAGTCTATGGGATCTTCTTCATGGAGCTTCCAAGAAGAAAAAGTTAGACTGGGACCTTCGTTTGAAAATAGCACTTGGAGCAGCGCAAGGGCTTGCCTATCTACACCATGATTGTTGTCCCCGTATCATCCACAGGGATGTGAAGTCATCAAATATTTTGTTGGACAAGGACTTCGAAGCCCATCTCACCGACTTTGGGATTGCTAAAAGTTTATGCCCCTCAAAGTCCCACACTTCTACCTACATAATGGGCACTATCGGTTACATCGACCCTGAGTATGCTCGAACTTCCCGCCTCACTGAGAAGTCTGATGTCTATAGCTTCGGTATTGTTTTACTTGAGTTGCTCACTGGCATGAAAGCTGTTGACAATGAATCCAATCTCCATCACCTGATTTTGTCAAAGACAGCAAACAATGCGGTGATGGAGACCGTTGATCCTGATATTACTGCCTCGTGTAAGGACCTGGGAGCAGTAAAAAAGGTATTTCAGCTGGCTCTTTTGTGCACCAAGAGACAGCCAGTTGATAGGCCGACAATGCATGAGGTGACACGTGTGCTGGGAAGCCTGGTGCCACCCATGTCCCCACCAAAACAAGCAGCTCCACTACCTGCTGCTGCTTTGCTTCCATCTGCAAAGGTGCCATCATCTTGCTATATGGACGAGTATGCAAATCTGAAGGCTCCACACTTGGTGAACTGCCCATCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGAGAGGTAATCTCCCAGAACAGTGAATGA 2982 0.4313 MTLLRSNGRVVMAFRFGLVLLAFVVCLNINSVVSDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCVWRGVACDNVTFNVVALNLSSLNLDGEISPAIGRLKSSVSIDLRGNRLSGQIPDEIGDCSSLKNLDLSFNEIRGDIPFSISKLKQLENLVLKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWFFDVRNNSLTGSIPESIGNCTAFQVLDLSYNQLTGKIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGPIPPELGNMTKLHYLELNDNHLSGYIPPELGKLTDLFDLNVANNNLEGPIPDNISSCKNLNSLNVHGNKLNGTIPPTFQTLESMTYLNLSSNNLQGFIPIELSRIGNLDTLDISNNNISGSIPSSLGDLEHLLKLNLSRNHLTGFVPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMISLRLENNKLSGDVTSLINCLSLSLLNVSYNNLVGVIPTSNNFTRFSPDSFIGNPGLCGYWMTLPCHGSHPTERVTISKAAILGIALGALVILLMILLAACRPYNPSPFPDGSLDKPVNYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSRYPQSFKEFETELETVGSIKHRNLVSLQGYSLSPYHLLFYDYMENGSLWDLLHGASKKKKLDWDLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGMKAVDNESNLHHLILSKTANNAVMETVDPDITASCKDLGAVKKVFQLALLCTKRQPVDRPTMHEVTRVLGSLVPPMSPPKQAAPLPAAALLPSAKVPSSCYMDEYANLKAPHLVNCPSMSTSDAQLFLKFGEVISQNSE 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0017 993 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 198 307 - -
Bisa05g0017 993 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Bisa05g0017 993 Gene3D Phosphorylase Kinase; domain 1 631 732 - -
Bisa05g0017 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 629 732 - -
Bisa05g0017 993 SUPERFAMILY L domain-like 315 571 - -
Bisa05g0017 993 ProSiteProfiles Protein kinase domain profile. 658 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0017 993 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Bisa05g0017 993 ProSiteProfiles Leucine-rich repeat profile. 127 150 IPR001611 GO:0005515
Bisa05g0017 993 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Bisa05g0017 993 Gene3D Ribonuclease Inhibitor 270 356 IPR032675 -
Bisa05g0017 993 Gene3D Ribonuclease Inhibitor 453 579 IPR032675 -
Bisa05g0017 993 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 197 - -
Bisa05g0017 993 Gene3D Ribonuclease Inhibitor 197 269 IPR032675 -
Bisa05g0017 993 SUPERFAMILY L domain-like 34 316 - -
Bisa05g0017 993 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 308 580 - -
Bisa05g0017 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Bisa05g0017 993 Pfam Protein kinase domain 661 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0017 993 Gene3D Ribonuclease Inhibitor 33 196 IPR032675 -
Bisa05g0017 993 Gene3D Ribonuclease Inhibitor 357 452 IPR032675 -
Bisa05g0017 993 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 172 924 - -
Bisa05g0017 993 ProSiteProfiles Leucine-rich repeat profile. 438 461 IPR001611 GO:0005515
Bisa05g0017 993 Gene3D Transferase(Phosphotransferase) domain 1 733 930 - -
Bisa05g0017 993 SMART serkin_6 658 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0017 993 ProSiteProfiles Leucine-rich repeat profile. 175 197 IPR001611 GO:0005515
Bisa05g0017 993 SUPERFAMILY Protein kinase-like (PK-like) 635 923 IPR011009 -
Bisa05g0017 993 SMART LRR_typ_2 460 483 IPR003591 -
Bisa05g0017 993 SMART LRR_typ_2 340 364 IPR003591 -
Bisa05g0017 993 SMART LRR_typ_2 412 436 IPR003591 -
Bisa05g0017 993 SMART LRR_typ_2 221 245 IPR003591 -
Bisa05g0017 993 SMART LRR_typ_2 173 197 IPR003591 -
Bisa05g0017 993 SMART LRR_typ_2 484 507 IPR003591 -
Bisa05g0017 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 733 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0017 Bisa-ChrBisa05 414136 423931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0017 106 927 Receptor kinase-like Gene Family AT5G07180 69.417 0.0 1148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Bisa05g0017 Pkinase 9.8e-43 CL0016