Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0004 ATGGAAGCCTACCCCACTGGCACTGCTAGTGCTACTGCTGCTGGTGATCATGAGTCCGCAAGCACAAAATACAAAGGCGTGAGGAAGCGCAAATGGGGGAAGTGGGTGTCGGAAATCAGGCTTCCCAGTAGCCGGGAACGCATCTGGCTGGGGTCCTACGACTCCCCACGCAAGGCCGCCAGGGCCTTCGACGCTGCCCTTTACTGTCTACGTGGCCCCCTCGCCAATTTCAATTTCCCTCACTCCCCCTTGGAGCTCCAGATTGTTGTGTCCCCTCACCCATCCCTTTCTCCTCCCCAAATCCGAGAGCTTGCTGCTAGGTTTGCCAACCGGCCCGACCCCCACCCTTCTTCTACCCAACCACCTCCTCCTAATTCTTCCTCTCCCTCTCCCTCCCCTTCCCATAATCACACCACTACCTCTACCACTGTTCAACTCGACCACGATTATTGGTCCTTTCTCAACTTCTCCGATGCCTTTGCCTCTCCTTCCTCTAATTTCAATGCTAATATGCACTCTGGGGACTTTTATCCCACATCCCCACCTCCTCTGCTCATCGAAAATCTGGATGCTAATGAAGGTGTTGATGCTTTTTCCCACCAATCATTATGCCTCTGGAACTTTTGA 627 0.5359 MEAYPTGTASATAAGDHESASTKYKGVRKRKWGKWVSEIRLPSSRERIWLGSYDSPRKAARAFDAALYCLRGPLANFNFPHSPLELQIVVSPHPSLSPPQIRELAARFANRPDPHPSSTQPPPPNSSSPSPSPSHNHTTTSTTVQLDHDYWSFLNFSDAFASPSSNFNANMHSGDFYPTSPPPLLIENLDANEGVDAFSHQSLCLWNF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0004 208 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Bisa05g0004 208 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bisa05g0004 208 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Bisa05g0004 208 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Bisa05g0004 208 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Bisa05g0004 208 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Bisa05g0004 208 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Bisa05g0004 208 CDD AP2 22 82 IPR001471 GO:0003700|GO:0006355
Bisa05g0004 208 MobiDBLite consensus disorder prediction 1 23 - -
Bisa05g0004 208 MobiDBLite consensus disorder prediction 110 141 - -
Bisa05g0004 208 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 147 - -
Bisa05g0004 208 MobiDBLite consensus disorder prediction 115 130 - -
Bisa05g0004 208 FunFam Ethylene-responsive transcription factor 2 22 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0004 Bisa-ChrBisa05 200701 201327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0004 22 208 AP2-EREBP Transcription Factor Family AT1G74930 47.090 9.26e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g0004 AP2 3.2e-12 CL0081