Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2355 ATGGATGAAGATCGGATATCTCACCAGAGAAGTGACTCAATGATCCGATCTGACAAGCCTCAGATCATGTGCCAAAGATGCGTTCCTTCTTGTTCTTTCCTCCCACCGCTTGCAGCCACAAGGCGATGTCATCGACTTCATCATCCCCAGCTTGAGCACTCGCATTGGTTGTGGATGCCTGCAATGATCTCAACTTTCCTTTTGATGGGAACCGCATATTCCGACAACCACTTGTTGTATTTCTACAACAATTCATCAGGTGTTTTCTTGTTTAACTCATCTGTACGCAATTGGTCTCTGTTCATTGAGAACGTGGAAAGCAAACTATTTTTGGAGAGCTTTGCTGCATTTGGCACGCTAGTTTCCTGCATTCCTTTTGCAATTTGAATAACTATTCAATTTGGTTTTGCGAAATTTGCATTGAATGGAACAGTCGAAATTGGCTGCACAATCGAGCACCAGGGAGATCTGATCCCTTGTTTATCTAATTTGAAAATTGTTGTTGTTGTTCTTCTCCCATTCTGGAAGCCGTATGACTTCTTTGTAAACGGGAGTTTGGATAGATTGGAACCTGTAACTTCTTACCAGGAGTTGATTAGTGATAGGGATAGGCAGATTGGGCTCTTTCCTCGTTGAGTATTCTTAGGGAGGCAACTAAATATTTTGCAGGATTATCCTTTTGTGCCAAATTCGAAAAATGACAATACACTTGAATCTTCTGGAAGCCCCCGACGTAGAAAGGTATTAGCTAGATGGGATCCAGTTGACGCATGCCGGCCTACAATTGATGAAGCACCTGTGTTTTATCCAACTATTGAGGAATTTGAGGACACAATTGGTTACATAGCGAAGATACGTCCCCAGGCTGAACCCCATGGCATATGCAGGATTGTCCCTCCACCTTGCTGGGTTCCACCTTGCCCACTTAAGGAGAAAAACTTATGGGAAAATGCCAAATTTCCAACCCGTATTCAACAAATTGACTTGCTCCAAAATAGGGAGCCCATGAAAAAGAAAACTAGGGGAAGGAGACGAAAGCGCAGAAAGCATTCGAAAATGGGAACATGCAGGGGACTTGCCAATTCAGTTTTGGCAGCTAACATTGCTTCTGAATCTGATGAAAAATTTGGATTCCAATCAGGATCGGACTTCACACTGGCAGATTTTCAACGATATGCTGATTTCTTTAAGGAAAGCTACTTTGGGATAAAAGATGCCAAACAAGACCTAAATATTAGTGATGATAATAACCAAAAGAGATGGGAGCCCTCTGTGCAGGACATTGAAGGTGAATATTGGCGAATAGTTGAGCAACCAACAGATGAAGTTGAGGTGTATTATGGAGCTGACTTGGAAGTTGGAGCACTTGGAAGTGGTTTTCCTAAGGCATCATCCCCAACTGAAAGTAATTTGGATCAGTATGCCCTGTCTGGCTGGAATCTGAATAACTTTCCCCGACTTCCTGGGTCTGTACTATGTTTTGAAGGAAGTGATATTTCAGGAGTACTTGTGCCTTGGCTATATGTGGGGATGTGTTTTTCATCCTTTTGCTGGCATGTTGAGGATCATCACCTCTATTCACTTAATTATCTACACTGGGGTGATCCTAAAGTATGGTATGGAGTACCTGGAAGCCATGCTTCAGCTTTGGAAGGTTCGATGAGGAAGCATTTACCTGATTTGTTTGAGGAACAACCAAATCTGCTGAATGAACTGGTTACACAACTATCTCCTTCAATTCTTAAATCTGAGGGAGTGCCTGTATATCGCACTGTTCAACATTCTGGGGAATTTGTTGTTACCTTTCCAAGGGCATACCACTCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCAGTGAATGTAGCTCCTGTTGATTGGTTAGTGCACGGCCAGGATGCGGTTGAGCTTTACAGTAAGCAATGTCGCAAGACATCATTGTCACATGACAAGTTGTTATTAGGATCAGCTCAGGAAGCTGTGCGAGCTCTTGCAGAGCTAGAACTTGGAAAGGAAACCTCAAAAAGTTTAAAATGGAGTAGTGTCTGTGGGAAAGATGGAGTTCTTACCAAGACAATTAAGACGAGGATCAAGATGGAAGAAGAGCGGTTAGGCTGTTTTTCAACTCATTTGAAGTTGCTGAAGATGGACAGAGACTTTGACATGGATAAGGAAAGAGAATGCTTCTTTTGCTTTTATGACTTGCACCTATCTGCTGTAGGTTGCAAGTGCTCTCCTGACAAATATTCTTGTCTGAGACACTCAAATTTGTTTTGTTTATGTGGAATGGACAAAAGATTTGTTCTTTTTCGTTATACTATAAATGAGTTAAATAAATTGGTTGAAGCATTAGAAGGGGAATCAGATGCTATTAAATTGTGGGGAAAAATAACTGCTGGAATTGATTCTGCTGCTAGTGAGGATGTTTACATAGATAAGCCTGATTTAGTGGAAGACAAATGCAAAACGAAGAGTCATGAAGAAAGAGAAAGATCATCTTGCTGTGCAGGAAGCAAGGAGAAGTCTAATATAAATGCACCTACCAGTCCTTGTAGTCATGTTTCTTCAGAGTTAGTCCAGTCAGAGTTTCACCAAGGAACTTTTAGTTCGTCATTTGGGACTATAGATAGTTGTATTGGCAATGCAAATGATAGAAATTTGGTCATGGGCAATGAAGTTAAGGCGGAGCAGGCAGGTTCTATGGATTTGAATTTTGATGTTATGTCTGGAGAAAATGAAAATTGTTTGTTGCTTGCTGATAACCATCACAATAAAGGAATAGCAACAGAAAAAGTCTGTTGTTTAGATGCTGCAAGGGAACAAGACAAGATGGAACTTGATGGTGACAATAATCTATCAGACTCAGTTGCTCTTCCAAAGAAAGATTTTTCATCATGTTCAAGGGATGCTCCCAATTCCAGTTCATATCATGGTGGTAAGTTGTTTGGGATTGATCTGCAAATTCGTCCAGATGCAGAAGTGCCACCTAACGGTGTAGTTAAGATAGAAGCTATAGAAACCTCCAGTAGAAATATACCATTGACAGACCAGAACTACCTAATGCAAAACCTTTGGAATTCTGTCGAGCCTATAAGTTTGGGCTCCATTGTATATGGAAAGCTGTGGTGCAGTAAGCATGCAATATTTCCAAAAGGATTCAAGAGCCGTGTCAAGTTCTTTAGCATGCTTGATCCAGCGAAAATATGTAGCTATATTTCTGAAGTTCTTGACGCTGGGTTTCTTGGGCCTATTTTCAAGGTTACTATGGAAGAGCATCCAAGTGAGGCTTTCACAAACATCTCAGCAGAGAAGTGCTGGGAATCGATTCTAAGGAGAGTAATTGATGAAGTAGTAAGGCAGAGGAATCTAGGGGAACTAGAACTTCCTCCCTTGAAACTCTTGCAAAACATTAATGGTCTTAAAATGTTTGGATTCCTTTCCCCATCTATTATTCAGGCCATCGAAGCTCAGGATCCCACTCATCAATGCATAGAGTACTGGAATCACAAGGAATTGGTCTCTGCATCTTCTTCGCCCAGTAGCAGTCATCATGGTTCAAGTAGCCCTTTAGGTGACATCAATTTAATGAAGCAGGACCAAGAGAATTCACTTATGAGAGGAAGCGTTCAATCATTTGAAGAGATGAAATCAATACTTGAAGGATTCTTAAGAAAGGCGAGTCCTGACGAGTTGAGCACATTGCTTAAGTTATTCAGCTCTGAAGCAGCGAGTGCTGAGTGGAGAGTGGCATTTACAACTCTGATTGAGGAGGTAATTGATTCTCCTCACCCTTTGTCTTCTTGGAGCCAGAGTTCATCATCCCCATGCAATTGGACTGGTGTAACCTGCAACACACTTGGTCAGAGTGATTGGCTTCAGCTTTTCTGGTTTAAGATTGTCAGGCCAGTTAAGCCCTTATATAGGATTGTTCTACCTTCTATATATAATTTATCTTCCCTTCCTAACTTAGCTGTAGCATCCAACAATTTGTGGGGTGAGATTCTTGAGGATGTTGGTCATAGGCTTCCAAAATTCATGTTCAACTTCTGCTTAAATAGATTCACAAGTAGAATTCCTAGTTCATTGCACAATCTCTCCAACATTCGACTTATTCACATCTTCAACAACCTCCTGGAAGGAACAGTGCCTCCAGGTCTTGGAAATCTCCCATTCCTTTGCATGTATAATATTGGTTATAATAAGTTAGTTAGTTTTAGAGACCAAGGTCTAGACTTCATTACTTCATTGACAAACACCATTTTTTTGAACTTTCTTGCAATTGATGGCAATAGGTTTGAAGATGTAATTCCTGACACCATCGAAAATTTGTCCAAGGCTCTTTCAAAGTTATACATGAGAAGGAATATTTTTCATGGAAACATACCTACCTCTCTTTCCAATCTTACTAGCTAG 4413 0.4099 MDEDRISHQRSDSMIRSDKPQIMCQRCVPSCSFLPPLAATRRCHRLHHPQLEHSHWLWMPAMISTFLLMGTAYSDNHLLYFYNNSSGVFLFNSSVRNWSLFIENVESKLFLESFAAFGTLVSCIPFAIXITIQFGFAKFALNGTVEIGCTIEHQGDLIPCLSNLKIVVVVLLPFWKPYDFFVNGSLDRLEPVTSYQELISDRDRQIGLFPRXVFLGRQLNILQDYPFVPNSKNDNTLESSGSPRRRKVLARWDPVDACRPTIDEAPVFYPTIEEFEDTIGYIAKIRPQAEPHGICRIVPPPCWVPPCPLKEKNLWENAKFPTRIQQIDLLQNREPMKKKTRGRRRKRRKHSKMGTCRGLANSVLAANIASESDEKFGFQSGSDFTLADFQRYADFFKESYFGIKDAKQDLNISDDNNQKRWEPSVQDIEGEYWRIVEQPTDEVEVYYGADLEVGALGSGFPKASSPTESNLDQYALSGWNLNNFPRLPGSVLCFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHASALEGSMRKHLPDLFEEQPNLLNELVTQLSPSILKSEGVPVYRTVQHSGEFVVTFPRAYHSGFNCGFNCAEAVNVAPVDWLVHGQDAVELYSKQCRKTSLSHDKLLLGSAQEAVRALAELELGKETSKSLKWSSVCGKDGVLTKTIKTRIKMEEERLGCFSTHLKLLKMDRDFDMDKERECFFCFYDLHLSAVGCKCSPDKYSCLRHSNLFCLCGMDKRFVLFRYTINELNKLVEALEGESDAIKLWGKITAGIDSAASEDVYIDKPDLVEDKCKTKSHEERERSSCCAGSKEKSNINAPTSPCSHVSSELVQSEFHQGTFSSSFGTIDSCIGNANDRNLVMGNEVKAEQAGSMDLNFDVMSGENENCLLLADNHHNKGIATEKVCCLDAAREQDKMELDGDNNLSDSVALPKKDFSSCSRDAPNSSSYHGGKLFGIDLQIRPDAEVPPNGVVKIEAIETSSRNIPLTDQNYLMQNLWNSVEPISLGSIVYGKLWCSKHAIFPKGFKSRVKFFSMLDPAKICSYISEVLDAGFLGPIFKVTMEEHPSEAFTNISAEKCWESILRRVIDEVVRQRNLGELELPPLKLLQNINGLKMFGFLSPSIIQAIEAQDPTHQCIEYWNHKELVSASSSPSSSHHGSSSPLGDINLMKQDQENSLMRGSVQSFEEMKSILEGFLRKASPDELSTLLKLFSSEAASAEWRVAFTTLIEEVIDSPHPLSSWSQSSSSPCNWTGVTCNTLGQSDWLQLFWFKIVRPVKPLYRIVLPSIYNLSSLPNLAVASNNLWGEILEDVGHRLPKFMFNFCLNRFTSRIPSSLHNLSNIRLIHIFNNLLEGTVPPGLGNLPFLCMYNIGYNKLVSFRDQGLDFITSLTNTIFLNFLAIDGNRFEDVIPDTIENLSKALSKLYMRRNIFHGNIPTSLSNLTS 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2355 1470 SMART fyrn_3 1034 1078 IPR003888 GO:0005634
Bisa04g2355 1470 FunFam Putative lysine-specific demethylase JMJ16 1026 1164 - -
Bisa04g2355 1470 ProSiteProfiles JmjN domain profile. 265 306 IPR003349 -
Bisa04g2355 1470 SUPERFAMILY Clavaminate synthase-like 478 660 - -
Bisa04g2355 1470 Gene3D Ribonuclease Inhibitor 1248 1410 IPR032675 -
Bisa04g2355 1470 PANTHER LYSINE-SPECIFIC DEMETHYLASE 257 971 - -
Bisa04g2355 1470 SMART fyrc_3 1084 1179 IPR003889 GO:0005634
Bisa04g2355 1470 ProSiteProfiles FYR domain FYRC motif profile. 1080 1170 IPR003889 GO:0005634
Bisa04g2355 1470 ProSiteProfiles JmjC domain profile. 473 639 IPR003347 -
Bisa04g2355 1470 SMART JmjN_1 264 305 IPR003349 -
Bisa04g2355 1470 Pfam jmjN domain 266 299 IPR003349 -
Bisa04g2355 1470 Pfam Leucine rich repeat N-terminal domain 1256 1284 IPR013210 -
Bisa04g2355 1470 SUPERFAMILY L domain-like 1247 1469 - -
Bisa04g2355 1470 Pfam C5HC2 zinc finger 728 780 IPR004198 -
Bisa04g2355 1470 Pfam JmjC domain, hydroxylase 506 622 IPR003347 -
Bisa04g2355 1470 Pfam F/Y-rich N-terminus 1031 1075 IPR003888 GO:0005634
Bisa04g2355 1470 Gene3D Cupin 250 623 - -
Bisa04g2355 1470 SMART cupin_9 473 639 IPR003347 -
Bisa04g2355 1470 Pfam F/Y rich C-terminus 1082 1168 IPR003889 GO:0005634
Bisa04g2355 1470 Gene3D Ribonuclease Inhibitor 1411 1470 IPR032675 -
Bisa04g2355 1470 Gene3D - 1025 1164 - -
Bisa04g2355 1470 ProSiteProfiles FYR domain FYRN motif profile. 1020 1078 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2355 Bisa-ChrBisa04 74931016 74951610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2355 273 1262 JUMONJI Transcription Factor Family AT4G20400 47.189 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa04g2355 JmjC 2.9e-46 CL0029