Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2354 ATGCAGAGCCAGATTGTGTGTAGTGGATGTAGGAGCATTTTGCTTTATCCTAGAGGGGCAACCAACGTTTGTTGTGCACTGTGCAACGCAATGACCTCTGTTCCTCCACCTGACTTCCATGCACCTGTATTTCTTGGAATTTTCACTTCTCCTGATGAGGGCTTATGGTCTTTGGATCTTCTGGACTTTATACTTGCAGATTTTTCTTTATGAATGGAGATGTCTCAACTGTATTGTGGAGGTTGTAGGACATTGCTAATGTACACACGTGGAGCTACAAGCGTGAGATGTTCTTGCTGTCAAACTTTAAACCTTTCACCAGCTAGGGGTTTCCCTTATGTGTTAGCAAACGGATTGGAAAGCTCTTCTGAGCAGATGTGTTTTATTCTTGCTTTGGGAGCATTACCCGTCCTCCCATCACATTTTTTGGGGTGTGATGTGATGCCTCCTTTGAGGGAAAGGAGGGTGGGCCAAACTGTCCTGGTTGAAAATCCTATGACTGTTGATGCAAGTGGGAAATTGGTTCACCTTGTTGCTGCCTTTGTATCTATAGCCATATGCCCATATTGGTTCATTCAGATTATATCTCGAGTCACAAGTCGTAGACATGCTTTTGCTCTGATGTCGGGTGCCTTGATGATTGTGATAAATCCGAGGCTTATGAAGATTAAGGCTTTGGCTATTGACTTTGGAGATGACTTAGAAGAGAAGCAACTAAGTGAAAATTTCTCCATGCTTCTTGTCGGACAGATATTCCTGAACCAACGCATTCAAGATGTAGATTGA 786 0.4326 MQSQIVCSGCRSILLYPRGATNVCCALCNAMTSVPPPDFHAPVFLGIFTSPDEGLWSLDLLDFILADFSLXMEMSQLYCGGCRTLLMYTRGATSVRCSCCQTLNLSPARGFPYVLANGLESSSEQMCFILALGALPVLPSHFLGCDVMPPLRERRVGQTVLVENPMTVDASGKLVHLVAAFVSIAICPYWFIQIISRVTSRRHAFALMSGALMIVINPRLMKIKALAIDFGDDLEEKQLSENFSMLLVGQIFLNQRIQDVD 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2354 261 Pfam LSD1 zinc finger 79 102 IPR005735 -
Bisa04g2354 261 Pfam LSD1 zinc finger 7 30 IPR005735 -
Bisa04g2354 261 NCBIfam zinc finger domain, LSD1 subclass 76 105 IPR005735 -
Bisa04g2354 261 NCBIfam zinc finger domain, LSD1 subclass 4 34 IPR005735 -
Bisa04g2354 261 PANTHER PROTEIN LSD1 2 181 IPR040319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2354 Bisa-ChrBisa04 74904764 74912956 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Bisa04g2354 zf-LSD1 3.6e-12 No_clan