Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2313 ATGGGTTTTCATTCTCCTTTTCTTCACGAGCTTGCCATAGCCACAATGCTACTATCTGCTTGTCTTCTGGAATCTCATAGCTCTAAGCCTTCCAAATTCATTAATGTCTCGGCGTACTTTGTGCAGCCAATCATTGTTTCTGCAGAAGTGGGTCTGGAAGCTAGTTGCTGTCTGTTTGAACTAGAAGCTTGGACTATACATAAGTTGGTGATAACTCATTTCTTGGAGAAAATGAAGCTCTTTAGCATTTTGGTGTTATCCTTATCTTTCTTCTCTGTAATGGGACAACTTCCTTCCCAGGACATTTTAGCATTGCTGGAATTTAAGAAAGGCATCAAGCATGATCCTACTGGTTATGTCCTTAATTCTTGGAATGAGGAATCCATTGACTTTAATGGATGCCCATCTTCCTGGAATGGACTTCTGTGTAATGGTGGTAGTGTTGCTGGGGTTGTCCTTGATAACCAGGGTCTCTCTGCTGAAGCAGACTTGAGTGTTTTCTCAAACCTCACAAAACTTGTCAAGCTCTCCATATCCAACAATTCCATATCTGGAAAACTCCCTGAAAACTTTGCTGATTTCAGAAGTCTTCAGTTTTTGGATGTCTCTGATAACCTTTTCAGTTCATCCATACCAGTGGGAATTGGTAAGCTAGCCAGCCTGCAGAACCTGTCATTGGCTGGGAATAACTTCTCTGGTCCAATTCCTCACTCTATTTCTGGGATGTCATCAATCCAATCTTTGGACTTGAGCCGGAACTCCTTTTCTGGTGCACTGCCAGCATTGTTGACTGAGCTGACTAGCCTGGCGTCTCTTAATTTGTCTCATAACAGCTTCACTGGAAAAATTCCCAAAGGTTTTGAACTGATTACTACACTTGAGAAGCTTGACCTGCATGGCAATATGCTTGATGGTCAATTAGACATTGAATTTATGCTTTTAACAAAAGCCACTTATGTAGATTTCAGTGAGAATATGCTAGTGAGTTCAAATCAGCACAAGTTTCTACCCCAAATCTCTGATAGTATCAAGCATTTGAATTTAAGCCACAACCAGCTTACCGGCTCATTTGATGGTGGAGGTGAGCTGCCAATTTTTGAAGAGTTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCTGGAGAATTGCCTGAATTTGAATTTGTTTATGATCTCGAGGTCCTTAAGCTTAGCAACAACAGATTTTCAGGACTTCTCCCAAATGGTCTACTAAAAGGAGACTCTTTGGTTCTAACTGAACTCGATTTGAGTGTGAACAATCTCTCAGGGCCAATAGGTATAATTACATCAACAACACTGCGCTTTCTTAATCTTTCCTCAAATGGTTTCACGGATGAGCTGCCACTTCTGACAGGAAGCAGTGCTGTACTTGATCTGTCAAATAACAAATTAAGAGGAAATTTAACCAGGATGATAAAATGGGGGAATATAGAATTTCTTGATCTCAGTATGAATCATTTGATGGGGCCTATCCCTGAGGTAACTCCTCAATTTTTACGATTAAATTATCTGAATCTCTCCCATAATTCCCTTAGCAGCTTCATCCCAAGTGTCTTAACTCGGTATCCAAAGCTAAGAGTGCTTGATGTTAGTTCCAACCAGTTGAATGGACTACTTCCTGCTAATCTGCTCAATATGCCAACTTTGCAAGAGCTCCATCTTGGAAATAATATGATTTCTGGTGGCATTAATTTATCGTCTTCTTCCCCTGGTCAATCTGATCTTCAGATTATTGATCTTTCTCACAACCAATTTAATGGCTATTTTCCAGAAGAATTTGGATCATTGACTGGCCTGAAAGTACTCAACATTGCAGGAAATAATTTCTCTGGTTGTCTTCCAACTACGATTGCTGACATAAGTTCACTAGACTCATTGGATTTATCAGAGAACCATTTTACAGGTTCATTACCAACTAACTTGCCAAAGGGACTCAAAAACTTTAATGTCTCATACAATGATCTGTCTGGAACTGTCCCAGAAAGTCTTAGGAAGTTTCCTAGTTCTTCTTTCTACCCAGGGAATTCTAGGTTGAATTTCCCAAATGGTCCTCCTGGATCAACCAATGTGCCAGCTGAAAGTTCCAAGAGGAAGTCTATGAGCACTATAGTCAAAGTGATTATTATAGTGTCAAGTGTGGTTGCTCTTTTCATATTAATCCTTCTTGCAATCTTCATACATTACATACGCATATCAAGAACTCCACCAGAATATACTGCAAGTAAGGACGTTCATGGGCGCACTCAACCAAACATAACTGGCGTAGGCCGTGCAACAGACAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGATCTCATGACCTCACGGAAAGGATCATCGTCAGAGATAATCAGTGCAGATGATGAAAAATTGGCTGCTATAACTACGATGTCCCCATCAAAAAGCCACTTTTCCTGGTCACCAGAGTCTGGTGATTCATTCACCCCTGAAAATGTTGCCAGACTTGATGTGAGATCACCTGATAAGTTGATAGGCGAGCTGCATTTCCTTGATGATATGATAACATTGACACCTGAGGAGCTTTCAAGGGCCCCGGCTGAAGTTTTGGGGAGAAGCAGTCATGGAACTTCGTATAAGGCTACACTGGAGAATGGTTTATTACTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCAAAACAAAGAAAAGAATTTGCTAAAGAGGCTAAAAAGTTCGCAAACATCAGGCATCCAAATGTTGTGGGATTGAGAGGGTACTATTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGATTATATTTCTCCCGGAAGTCTTGCCACTTTTTTATATGATCGACCAGGAAGAAAAGGTCCACTAACCTGGCCCCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGTCTGAACTATCTCCATTTCGATCGAGCTGTCCCTCACGGAAACCTCAAAGCAACTAATGTGTTGTTAGATACATCTGATCTGAATGCAAGAGTTGCTGATTACTGCCTCCACCGGCTCATGACTCAGGCTGGTACTACTGAACAGATCCTTGATGCTGGAGTCTTAGGCTACCGAGCACCAGAGCTAGCTGCTTCCAAGAAGCCGACCCCCTCCTTCAAATCAGATGTTTATGCCTTTGGAGTGATACTTTTGGAACTTTTAACCGGAAGGTGTGCTGGTGATGTGATATCTGGTGAGGAGGGAGGTGTTGACATGACCGATTGGGTAAGGTTACGAGTGGCAGAAGGACGAGGCTCAGAATGCTTTGATGCTGCATTGATGCCAGAAATGAGTAATCCACTTGCAGAAAAGGGAATGAAGGATGTCCTCGAAATAGCTCTCCGATGCATACGATCGGTTTCCGAGAGGCCAGGTATCAAGACTATATATGAGGACCTTTCATCTATATAG 3417 0.4203 MGFHSPFLHELAIATMLLSACLLESHSSKPSKFINVSAYFVQPIIVSAEVGLEASCCLFELEAWTIHKLVITHFLEKMKLFSILVLSLSFFSVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFNGCPSSWNGLLCNGGSVAGVVLDNQGLSAEADLSVFSNLTKLVKLSISNNSISGKLPENFADFRSLQFLDVSDNLFSSSIPVGIGKLASLQNLSLAGNNFSGPIPHSISGMSSIQSLDLSRNSFSGALPALLTELTSLASLNLSHNSFTGKIPKGFELITTLEKLDLHGNMLDGQLDIEFMLLTKATYVDFSENMLVSSNQHKFLPQISDSIKHLNLSHNQLTGSFDGGGELPIFEELKVLDLSYNQLSGELPEFEFVYDLEVLKLSNNRFSGLLPNGLLKGDSLVLTELDLSVNNLSGPIGIITSTTLRFLNLSSNGFTDELPLLTGSSAVLDLSNNKLRGNLTRMIKWGNIEFLDLSMNHLMGPIPEVTPQFLRLNYLNLSHNSLSSFIPSVLTRYPKLRVLDVSSNQLNGLLPANLLNMPTLQELHLGNNMISGGINLSSSSPGQSDLQIIDLSHNQFNGYFPEEFGSLTGLKVLNIAGNNFSGCLPTTIADISSLDSLDLSENHFTGSLPTNLPKGLKNFNVSYNDLSGTVPESLRKFPSSSFYPGNSRLNFPNGPPGSTNVPAESSKRKSMSTIVKVIIIVSSVVALFILILLAIFIHYIRISRTPPEYTASKDVHGRTQPNITGVGRATDRGGALVVSAEDLMTSRKGSSSEIISADDEKLAAITTMSPSKSHFSWSPESGDSFTPENVARLDVRSPDKLIGELHFLDDMITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLATFLYDRPGRKGPLTWPQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTSDLNARVADYCLHRLMTQAGTTEQILDAGVLGYRAPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDMTDWVRLRVAEGRGSECFDAALMPEMSNPLAEKGMKDVLEIALRCIRSVSERPGIKTIYEDLSSI 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2313 1138 Gene3D Transferase(Phosphotransferase) domain 1 935 1138 - -
Bisa04g2313 1138 Pfam Leucine rich repeat N-terminal domain 99 144 IPR013210 -
Bisa04g2313 1138 Gene3D Ribonuclease Inhibitor 331 701 IPR032675 -
Bisa04g2313 1138 ProSiteProfiles Leucine-rich repeat profile. 368 390 IPR001611 GO:0005515
Bisa04g2313 1138 FunFam Pollen receptor-like kinase 1 935 1138 - -
Bisa04g2313 1138 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 97 340 - -
Bisa04g2313 1138 SMART LRR_typ_2 505 528 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 242 265 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 627 651 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 366 388 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 194 218 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 529 553 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 389 412 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 603 626 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 170 193 IPR003591 -
Bisa04g2313 1138 SMART LRR_typ_2 266 289 IPR003591 -
Bisa04g2313 1138 SUPERFAMILY L domain-like 120 452 - -
Bisa04g2313 1138 PANTHER OS07G0626500 PROTEIN 82 1138 - -
Bisa04g2313 1138 Pfam Leucine rich repeat 164 206 IPR001611 GO:0005515
Bisa04g2313 1138 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Bisa04g2313 1138 Pfam Leucine rich repeat 582 640 IPR001611 GO:0005515
Bisa04g2313 1138 Pfam Leucine Rich repeat 437 453 IPR001611 GO:0005515
Bisa04g2313 1138 SUPERFAMILY Protein kinase-like (PK-like) 860 1135 IPR011009 -
Bisa04g2313 1138 ProSiteProfiles Protein kinase domain profile. 857 1138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2313 1138 FunFam Leucine-rich repeat receptor-like protein kinase 842 934 - -
Bisa04g2313 1138 Gene3D Ribonuclease Inhibitor 261 330 IPR032675 -
Bisa04g2313 1138 Pfam Protein tyrosine and serine/threonine kinase 861 1058 IPR001245 GO:0004672|GO:0006468
Bisa04g2313 1138 SUPERFAMILY L domain-like 366 664 - -
Bisa04g2313 1138 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 434 689 - -
Bisa04g2313 1138 Gene3D Phosphorylase Kinase; domain 1 846 934 - -
Bisa04g2313 1138 Gene3D Ribonuclease Inhibitor 100 260 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2313 Bisa-ChrBisa04 74197564 74202180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2313 82 499 Receptor kinase-like Gene Family AT3G28040 32.258 3.82e-34 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa04g2313 PK_Tyr_Ser-Thr 4.8e-29 CL0016