Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2293 ATGAGTAATAACCGACGGGAAGTTATGAAGGCTGCCTCTGGTACGGTTTCAATACTTATTTTTTTCACCCCACCCTCGAGGGAAAGCTTGAGGCTGGAAGAAACTGCTTCTTTTATTTGGTTTTTTACAGGTAAAAGAAAATTGAGAGATCTATTGCTTCAGAAAGATAACCGTACTTGCGCTGATTGTAATGCTCCAGATCCTAAATGGGCGTCAGCAAATATTGGTGTTTTTATATGCTTAAAATGTTGTGGTGTGCACAGAAGCCTTGGTACGCATATATCAAAGGTTTTGTCCGTGACATTGGATGAATGGTCAGATGATGAAATAGATTCAATGATTGAAGTTGGAGGAAATGCTTCTGCTAATAAAATTTATGAGGCTCATCTTCCAGAAGGATATACAAGGCCCACACCAGATGCCAGTCACGAGCAGCGTTCAAATTTCATCCGGTCCAAGTATGAGCTTCAAGAATTCTTGAAACCTGATCTGCGCATTTCATCTGGAAAATCCTCTGTAGGATCAAATTCTTCCAAAATTGTGGATTATTTATTTAGCTCTTCACAGAAAATGGAAGGCATGGTGGAATTTATTGGATTGCTGAAGGTGAAAGTGATTAAAGGAACAAATTTGGCTGTTCGAGATATGATGTCGAGTGATCCATATGTCATCTTAAATATTGGCAAGCAGACTGTCCAGACAACTGTAATCAACAGTAACTTGAATCCAGTCTGGAATGAGGAACTTATGCTGTCTGTTCCCCAAGAATATGGACCATTGAAATTGCAAGTATATGATCACGATACGTTTTCTGCTGATGACATAATGGGGGAAGCGGAAATCGATCTCCAGCCCCTGATAACATCAGCAATGGCTTTTGGAGATGCGGGAATGTTTTCTGACATGCAGATAGGAAAATGGCTTAAATCTGACGACAATGCTCTCATAGAGGATAGCCCAGTTAATATAATTGATGGTAAGGTTAAACAGATGATGTCTATCAAGCTCCTGAACGTTGAATCTGGAGAATTAGAGCTAGAACTTGAGTGGATGCCTCTTGATCAATAG 1068 0.3998 MSNNRREVMKAASGTVSILIFFTPPSRESLRLEETASFIWFFTGKRKLRDLLLQKDNRTCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDDEIDSMIEVGGNASANKIYEAHLPEGYTRPTPDASHEQRSNFIRSKYELQEFLKPDLRISSGKSSVGSNSSKIVDYLFSSSQKMEGMVEFIGLLKVKVIKGTNLAVRDMMSSDPYVILNIGKQTVQTTVINSNLNPVWNEELMLSVPQEYGPLKLQVYDHDTFSADDIMGEAEIDLQPLITSAMAFGDAGMFSDMQIGKWLKSDDNALIEDSPVNIIDGKVKQMMSIKLLNVESGELELELEWMPLDQ 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2293 355 CDD C2_ArfGAP 198 342 - -
Bisa04g2293 355 SMART C2_3c 200 295 IPR000008 -
Bisa04g2293 355 ProSiteProfiles C2 domain profile. 179 296 IPR000008 -
Bisa04g2293 355 CDD ArfGap 48 154 - -
Bisa04g2293 355 Pfam C2 domain 200 289 IPR000008 -
Bisa04g2293 355 ProSiteProfiles ARF GTPase-activating proteins domain profile. 45 168 IPR001164 GO:0005096
Bisa04g2293 355 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 197 355 - -
Bisa04g2293 355 Pfam Putative GTPase activating protein for Arf 46 161 IPR001164 GO:0005096
Bisa04g2293 355 Gene3D Arf GTPase activating protein 42 166 IPR038508 -
Bisa04g2293 355 SUPERFAMILY ArfGap/RecO-like zinc finger 45 161 IPR037278 -
Bisa04g2293 355 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 44 355 IPR044518 GO:0005096|GO:0005543
Bisa04g2293 355 Gene3D C2 domain 197 355 IPR035892 -
Bisa04g2293 355 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 195 292 IPR035892 -
Bisa04g2293 355 PRINTS HIV Rev interacting protein signature 57 76 IPR001164 GO:0005096
Bisa04g2293 355 PRINTS HIV Rev interacting protein signature 97 118 IPR001164 GO:0005096
Bisa04g2293 355 PRINTS HIV Rev interacting protein signature 76 93 IPR001164 GO:0005096
Bisa04g2293 355 SMART arf_gap_3 45 167 IPR001164 GO:0005096
Bisa04g2293 355 FunFam Arf-GAP with dual PH domain-containing protein 1 42 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2293 Bisa-ChrBisa04 72857391 72863004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2293 43 355 C2H2 Transcription Factor Family AT4G05330 75.617 0.0 504