Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2289 ATGACTTCTGATCATGATCTCACTGATAATGAACCCGATGAGCATCAAAAGCAGTCAGATTCACAGATGCAGTCTTCATCTGCAGATGGAATTTCTCATTCAGGTATTGCTACCCAGAATGTTCAGTGTGCAGTGCCTCCGCAGCTTGGAACTGGACATGCTTTGGCGCCGCCAGTTTACCCATACCCAGATCCTTACTATAGGAGCATCTTTGCTCCCTATGAGACGCAACCTTATCCCCCACAACCACCCTATAGAGCACAGCCAATGGTCCATCTTCAGTTAATGGGAATTCAACAAGCTGGTGTTCCTCTACCAACTGATGCAGTGGAAGAGCCTGTATTTGTCAATGCAAAACAGTATCACGGTATATTAAGACGCAGGCAGTCTCGTGCCAAAGCTGAATCTGTAAACAAAGTTATCAAGAATCGCAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGAAGAGCACGTGGATGTGGCGGTCGGTTTCTCAATTCAAAGAAAACTGAGAACGAACAGAGCGAGGTCGCATCAACCGACAAACCCCTGTCCAATATCAATCTCAATCCTGACAAAAATGATCTTGCTTCATCAGATAGGATTTCCTAA 621 0.4509 MTSDHDLTDNEPDEHQKQSDSQMQSSSADGISHSGIATQNVQCAVPPQLGTGHALAPPVYPYPDPYYRSIFAPYETQPYPPQPPYRAQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESVNKVIKNRKPYLHESRHLHALRRARGCGGRFLNSKKTENEQSEVASTDKPLSNINLNPDKNDLASSDRIS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2289 206 MobiDBLite consensus disorder prediction 19 39 - -
Bisa04g2289 206 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 13 185 IPR001289 GO:0003700|GO:0006355
Bisa04g2289 206 MobiDBLite consensus disorder prediction 170 200 - -
Bisa04g2289 206 Gene3D - 110 171 - -
Bisa04g2289 206 ProSitePatterns NF-YA/HAP2 subunit signature. 115 135 IPR018362 GO:0003677|GO:0016602
Bisa04g2289 206 MobiDBLite consensus disorder prediction 1 18 - -
Bisa04g2289 206 MobiDBLite consensus disorder prediction 1 39 - -
Bisa04g2289 206 PRINTS CCAAT-binding transcription factor subunit B signature 144 167 IPR001289 GO:0003700|GO:0006355
Bisa04g2289 206 PRINTS CCAAT-binding transcription factor subunit B signature 113 135 IPR001289 GO:0003700|GO:0006355
Bisa04g2289 206 ProSiteProfiles NF-YA/HAP2 family profile. 110 170 IPR001289 GO:0003700|GO:0006355
Bisa04g2289 206 MobiDBLite consensus disorder prediction 166 206 - -
Bisa04g2289 206 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 112 167 IPR001289 GO:0003700|GO:0006355
Bisa04g2289 206 SMART cbf3 109 170 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2289 Bisa-ChrBisa04 72837182 72841327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2289 1 206 CCAAT-HAP2 Transcription Factor Family AT1G30500 58.173 2.15e-67 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bisa04g2289 CBFB_NFYA 4.2e-26 No_clan