Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2276 ATGGTCTCCGGCTTCAGCAAGCTCAAGCGCTCCTTCTCCAACATCTTCTCTTCTTCTCGTTCCTCTTCCGTCAAATCTGATTGCTCGCCGTCTCAGCTTCACTGCCCCGCCGCCGCCTCCGACTCCTCCGGCACGCCTCCGCAACCGCCGCCGTCTCACCGCCGGTCCTTCTCAAATGTCGACCGCTCCTCCTCCTCCTCCCAGTTGTGCCGCTCCTCCTCTTCGCTGTCCCGCCTCTCCCGCGCTTTCAGCGTTCGATCATCCAAGAAGACTTGCACCATTTGCTTGGGTGAGTTGAAGATAGGGCAAGGCCGAGCCATCTTTGTTGCAGAGTGTTCCCATTCTTTCCATTTCAGTTGTATTGCTTCCAATGTCAGGCATGGAAGCCATGTCTGTCCCATTTGTCGCTCGAAATGGAGAGATATACCGTATCAAGCTCCAGCCGGCGTTCCAGCTCCTAGCCAACATAGCCGGGGAAGGGCCAGAGCACCGGTCGTACCGATCACTGCACTGCCTCCCTTGATGCCGGCCTTAGCAAACCAAGAGCCTAGTCACTTCTCTGATGATGAACCACTCCCAGTCTCACCAGCTTCCACAGATCATGCTTCATCTTCACCCAATGTCATCACTGTCAAGTCCTTTACAGAGTTTCCTGCCCTCCCTGCATCCGAGGCTCGTTCAGAATTTGCAATTCTTGCCAGCATTCGTGCACCGGCTCTTTCTCAACGTGATCGAGCCCCGGTTGACCTGGTTGCAGTGCTTGACATCAGTGGCAGCATGACTGGTCCAAAGCTGTCACTCCTCAAGCAAGCTGTTCACTTTGTCATTCAGAACTTGGGCCCTTCGGACCGCCTCTCTATCGTAGTATTCTCCTCCATGGCTCTTAGAATCTTCCCTCTTCGAAGGATGACTGATGGCGGCCAAGCCGATGCATCCCTTGCCATCAATTCTCTTGCAACAGATGGTGGAACCAACATCCTCAATGGCCTCAGAAAAGGTGTTCGTGTCCTTGAAGAACGACGAGAACGAAACCCGGTTGCTAGCATTATACTCCTCTCAGATGGCAAGTCTCAACCTCACATAAACCTGCCATTGGCACGTCAAAACCAACAATTGCCTGCCTCCATTCCTGTTCATTCCTTTGGCTTTGGTACAGATCATGATTCTGTTGCATTGCACACGATATCAGATGCATCAGGTGGCACATTTTCGTTCATCGAGTCCGTTGGCATGGTGCAAGATGCCTTTGCTAGGTGCATTGGTGGTCTTCTGAGTGTTGTGGCTCAAGAGCTACAAATCACAGTCAAAACATTAGCTTCTGGTGTGCAAATTAGCTCAATTCGCTCAGGGAGATACATCAGTGAAATCTGCGACGATGGTAAGCGATGTGTCATCGATGTCGGTAACATGTATGCAGAAGAAGAGAAAGGATTCCTGTTATACCTATCAATCCCAGCTGTTGCAGCAGCCGTTGAAGGAGAAGAAGAAGAAATGGAGGTCAAGACTTCCTTACTGGACATTACATGCCAATACAAAGATTCAGCATCTGAGAATGAGCTCGTCAGGGTCAATGGTGAGCGAGTGGAAATACGAAGATCACAAGGTCTGTTACCTACTGACATAATAGTGTCTTTGGAGGTTGACAGACATCGAAATCGTGTCCTGGTGGCTGACGGAATAGCTGAAGCAAGACGATTAGCCGAGAGGGGAGACTTGCAGGTTGCAAAAGCTGTACTAGAAGAAAAGAGATCAATTCTATCATCTTCAGCTTCAGCTTCAGCAGGAGACGCTGTCTGCACTTGGCTTGATGCTGAATTGAGAGAAACGAGAGAGAGGATGGAGAGCCGGGAGCGATATGAACACACAGGAAGGGCTTATGTCCTCTCAGGATTGAGCTCACATTCATGGCAGAGGTCTACCACAAGGGGAGACTCCATGACACAGACATTTGTCAGCGGGGACGTCACAGACCTGCCCATAGGGTATGACACGCCGTCAATGGTGAACATGGCTTCTGGTATTTCTGATGACTGA 2034 0.5074 MVSGFSKLKRSFSNIFSSSRSSSVKSDCSPSQLHCPAAASDSSGTPPQPPPSHRRSFSNVDRSSSSSQLCRSSSSLSRLSRAFSVRSSKKTCTICLGELKIGQGRAIFVAECSHSFHFSCIASNVRHGSHVCPICRSKWRDIPYQAPAGVPAPSQHSRGRARAPVVPITALPPLMPALANQEPSHFSDDEPLPVSPASTDHASSSPNVITVKSFTEFPALPASEARSEFAILASIRAPALSQRDRAPVDLVAVLDISGSMTGPKLSLLKQAVHFVIQNLGPSDRLSIVVFSSMALRIFPLRRMTDGGQADASLAINSLATDGGTNILNGLRKGVRVLEERRERNPVASIILLSDGKSQPHINLPLARQNQQLPASIPVHSFGFGTDHDSVALHTISDASGGTFSFIESVGMVQDAFARCIGGLLSVVAQELQITVKTLASGVQISSIRSGRYISEICDDGKRCVIDVGNMYAEEEKGFLLYLSIPAVAAAVEGEEEEMEVKTSLLDITCQYKDSASENELVRVNGERVEIRRSQGLLPTDIIVSLEVDRHRNRVLVADGIAEARRLAERGDLQVAKAVLEEKRSILSSSASASAGDAVCTWLDAELRETRERMESRERYEHTGRAYVLSGLSSHSWQRSTTRGDSMTQTFVSGDVTDLPIGYDTPSMVNMASGISDD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2276 677 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 90 671 - -
Bisa04g2276 677 Gene3D von Willebrand factor, type A domain 249 421 IPR036465 -
Bisa04g2276 677 CDD vWA_C3HC4_type 248 407 - -
Bisa04g2276 677 SMART ring_2 92 135 IPR001841 -
Bisa04g2276 677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 146 IPR013083 -
Bisa04g2276 677 ProSiteProfiles Zinc finger RING-type profile. 92 136 IPR001841 -
Bisa04g2276 677 Pfam VWA / Hh protein intein-like 596 672 IPR032838 -
Bisa04g2276 677 SMART VWA_4 247 418 IPR002035 -
Bisa04g2276 677 Pfam von Willebrand factor type A domain 249 414 IPR002035 -
Bisa04g2276 677 SUPERFAMILY vWA-like 245 420 IPR036465 -
Bisa04g2276 677 CDD RING-H2_WAVH2 86 141 - -
Bisa04g2276 677 MobiDBLite consensus disorder prediction 54 69 - -
Bisa04g2276 677 SUPERFAMILY RING/U-box 89 145 - -
Bisa04g2276 677 Pfam RING-like zinc finger 92 121 IPR001841 -
Bisa04g2276 677 ProSiteProfiles VWFA domain profile. 249 427 IPR002035 -
Bisa04g2276 677 MobiDBLite consensus disorder prediction 16 69 - -
Bisa04g2276 677 MobiDBLite consensus disorder prediction 16 42 - -
Bisa04g2276 677 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2276 Bisa-ChrBisa04 72590640 72595386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2276 85 141 C3H Transcription Factor Family AT1G74410 42.373 2.98e-06 47.0