Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2272 ATGAAGGAGGGAGGGAATGGCGGTAGGAAGCAGGGAGCGGCGTCGCCGTGCGCGGCATGCAAGCTGCTTCGCAGAAGATGCGCGCAGGACTGTGTGTTCGCTCCGTATTTCCCGGCCGACGAACCTCACAAGTTCGCCAATGTTCACAAGGTCTTCGGCGCGAGCAATGTCAACAAGATGCTCCAGGAGCTACCAGTTCATCAAAGAGGAGATGCAGTGAGCAGTATGGTGTATGAAGCAAATGCAAGAGTGAGAGACCCTGTGTATGGGTGTGTTGGAGCCATCTCTTCTCTTCAACAGCAAATTGATCTGCTTCAGACCCAACTGGCCTTAGCCCAGGCTGAGGTTGTGCACCTTAGGGTTAGCCAGACAGCTTCCCTTTCCAACCATGGGCTTAGCCCAACCAGCCCAACCAACAGTGGGTCACCACCACCATCCAAGCCCATGGTCTCGCAACACAAGCCCATTTTTGACATGGACATGGTGGTGGACCACTCCACCTATGCTGATTCCATGTGGTCTTGTTAG 528 0.5436 MKEGGNGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAEVVHLRVSQTASLSNHGLSPTSPTNSGSPPPSKPMVSQHKPIFDMDMVVDHSTYADSMWSC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2272 175 Coils Coil 95 115 - -
Bisa04g2272 175 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Bisa04g2272 175 MobiDBLite consensus disorder prediction 127 152 - -
Bisa04g2272 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 137 - -
Bisa04g2272 175 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2272 Bisa-ChrBisa04 72551193 72554469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2272 1 175 AS2 family AT1G31320 74.286 1.08e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa04g2272 LOB 1.1e-43 No_clan