Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2133 ATGGCGCCGAGTAAAACCAAAGACCTACAGCTAACTTCCCTCTCCGCCGCCGGCGCCGGGGATGATGATGCTGGTGACATGGAGGATGTACGGCTTTTGGACTCCTACGATAATAGAAACTACAATGGTGCCGATGGAATCGAAGAAGGGGGGAAGGGAATTCAGGTCAGAGTTACCGGTATGACCTGCGCGGCTTGCTCCAACTCCGTCGAAGCAGCTCTGAAGGCCGTCGATGGCGTCATCAGCGCCTCCGTGGCTCTGCTCCAGAACAAGGCTGAAGTGGTTTACAACCCGGCCATCGTTAAGGATGTAGACATTAAAAATGCAATTGAAGATGCAGGATTTGAAGCAGACATATTACCTGAACCCAGTCCTAGTGCACATGGAAAAAAGCAGCAAAAAACCCTGGTAGGACAGTTTACAATTGGCGGTATGACATGTGCAGCCTGTGTAAATTCTGTTGAAGGTATTTTAAGAAGTCTTACAGGGGTCAAAAGGGCGGTGGTAGCTTTGTCTACTTCCTTAGGAGAAGTAGAATATGATCCTAATGTAATTAGTAAAGACGATATAATCAATGCAATTGAAGATGCTGGTTTTGAAGGTTCATTTGTACAGAGCAGTGAGCAGGATAAAGTAATTTTATGGGTTGTTGGTGTATACAGCCTGATTGATGCACAATTCTTAGAAGGCATGCTCAGCAACATGAAAGGAGTAAGGCAGTTTCATTTTGACCAGATATTGAGTGAATTGGAAGTTCTTTTTGATCCTGAAGTCTTCAGCTATAGATCCTTAGTTGATGAAATTGAGAGGGGAAGTAGTGGCAAGTTTAAATTACGTGTCAGAAGCCCTTATACAAGAATGTCTTCCAAAGATGTTGAAGAGACCTCAACTATGTTTCGGTTATTTATCTCCAGCCTGTCTCTTAGTATTCCTCTCTTCTTCATGCGGGTAATTTGTCCTAATATACCAATGGTATATTCCTTATTACTTTGGAAATGTGGACCTTTCCTCATGGGTGATTGGTTGAAGTGGGCATTGGTGAGTGTAATCCAATTTGTAATTGGGAAGCGGTTCTACATTGCAGCTGGCAGAGCTCTTAGAAATGGTTCAACTAACATGGATGTCTTGGTTGCTTTGGGAACTACAGCATCTTATGTCTATTCTGTTTGTGCTCTACTATATGGTGCTCTTACTGGATTTTGGTCCCCAACATATTTTGAGACGAGTGCTATGCTCATAACATTTGTATTATTGGGCAAGTACTTGGAATGCCTTGCCAAGGGAAAGACATCGGATGCCATTAAGAAGTTAGTAGAACTTGCTCCTGCAACAGCTTTATTGGTTGTCAAAGATAAAGGTGGAAGATCTATTGAAGAGAGGGAAATAGATTCTTTGCTCATTCAACCTAGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCTGCTGATGGCATTGTTACATGGGGCTCAAGTTATGTAAATGAGAGTATGATAACTGGTGAATCTGTACCTGTTTTGAAGGAGGTGAATGCAGCTGTTGTTGGAGGTACAATAAATTTACATGGCATCCTACTTATTCAAGCTACTAAAGTAGGATCAAATACAGTTTTGAGTCAGATAATTAGCTTGGTTGAGACAGCCCAGATGTCTAAAGCCCCCATTCAGAAATTTGCCGACTATGTAGCAAGCATATTTGTTCCCACTGTCGTTGCTTTGGCACTATTGACATTATTGAGCTGGTATATTGCTGGGGCACTTGGAGCTTACCCTGAGGAATGGCTTCCGGAAAATGGAAATCATTTTGTTTTTGCCCTTATGTTTTCAATATCTGTAGTGGTGATTGCATGTCCCTGTGCACTTGGCTTGGCAACACCAACAGCTGTCATGGTAGCAACAGGTGTTGGGGCTAACAACGGAGTGTTGATTAAAGGAGGAGATGCCTTGGAAAGGGGTCAGATGGTGAAGTATGTAATATTTGATAAAACAGGCACTTTAACACAGGGAAAACCTACTTTCACTACTTGCAAGGTATTCACAGGAATGGATCGTGGGGAATTTCTAAAATTGGTGGCTTCTGCAGAGGCTAGCAGTGAACACCCACTGGCAAAAGCAATAGTGGCATATGCCCGTCATTTTCATTTCTTTGATGAGTCCTCTGCAGCTACTGGTATCAAAGATGACGCCAAAGAGTTGAAGTCTGGTTGGCTTTTCGATGTCTCAGATTTCTTGGCAATTCCAGGAAAAGGCATTCAGTGTTTGATAGGCGGGAAGCGTATTTTGGTTGGTAATAGGAAACTAATGGTGGAAAATGGCATAGATATCTCAACTGAAGAGGAAAATTTTTTGGTAGAACTGGAAGAAAGTGCAAAGACAGGGATACTGGTTGCATGTGATGATAAGCTAACTGGAGTTATAGGGGTAGCAGACCCGCTAAAAAGAGAGGCTCCGGTGGTTATTGAGGGCCTCAAGAAAATGGGTGTCATGCCTGTTATGGTTACGGGGGATAACTGGAGAACAGCTCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTCAGGGCAGAAGTGATGCCCGCAGGAAAGGCCGATGTTGTTCATTCATTCCAGAAAGATGGAAGTGTAGTTGCAATGGTAGGTGATGGTATCAATGACTCTCCTGCTTTAGCTGCTGCAGATGTTGGTATAGCGATTGGTGCTGGAACTGATATTGCAATAGAAGCTGCCGACTATGTGTTGATGAGAAGCAATCTGGAAGATGTCATCACAGCTATTGACCTCTCTAGGAAGACCTTCTCTCGTATTCGGCTGAATTATGTTTTTGCAATGGCCTACAATGTGGTTGCTATACCAGTTGCTGCTGGGGCTCTCTATCCTTCATTAGGGATCAAGCTGCCACCATGGGTTGCTGGTACATGCATGGCTCTCTCATCTGTAAGTGTTGTATGCTCCTCTTTGCTTCTCAGGAGATATAGAAGACCTAGGCTCACTGAAATACTTGAAATAGTTGTAGAAAGGAATTGA 3024 0.4332 MAPSKTKDLQLTSLSAAGAGDDDAGDMEDVRLLDSYDNRNYNGADGIEEGGKGIQVRVTGMTCAACSNSVEAALKAVDGVISASVALLQNKAEVVYNPAIVKDVDIKNAIEDAGFEADILPEPSPSAHGKKQQKTLVGQFTIGGMTCAACVNSVEGILRSLTGVKRAVVALSTSLGEVEYDPNVISKDDIINAIEDAGFEGSFVQSSEQDKVILWVVGVYSLIDAQFLEGMLSNMKGVRQFHFDQILSELEVLFDPEVFSYRSLVDEIERGSSGKFKLRVRSPYTRMSSKDVEETSTMFRLFISSLSLSIPLFFMRVICPNIPMVYSLLLWKCGPFLMGDWLKWALVSVIQFVIGKRFYIAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGRSIEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMITGESVPVLKEVNAAVVGGTINLHGILLIQATKVGSNTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVALALLTLLSWYIAGALGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERGQMVKYVIFDKTGTLTQGKPTFTTCKVFTGMDRGEFLKLVASAEASSEHPLAKAIVAYARHFHFFDESSAATGIKDDAKELKSGWLFDVSDFLAIPGKGIQCLIGGKRILVGNRKLMVENGIDISTEEENFLVELEESAKTGILVACDDKLTGVIGVADPLKREAPVVIEGLKKMGVMPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVHSFQKDGSVVAMVGDGINDSPALAAADVGIAIGAGTDIAIEAADYVLMRSNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVVAIPVAAGALYPSLGIKLPPWVAGTCMALSSVSVVCSSLLLRRYRRPRLTEILEIVVERN 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2133 1007 ProSiteProfiles Heavy-metal-associated domain profile. 52 118 IPR006121 GO:0046872
Bisa04g2133 1007 FunFam Copper-exporting P-type ATPase A 134 204 - -
Bisa04g2133 1007 ProSitePatterns Heavy-metal-associated domain. 142 172 IPR017969 GO:0046872
Bisa04g2133 1007 Gene3D - 52 122 - -
Bisa04g2133 1007 Gene3D - 134 203 - -
Bisa04g2133 1007 Gene3D - 626 936 IPR023214 -
Bisa04g2133 1007 CDD HMA 55 117 IPR006121 GO:0046872
Bisa04g2133 1007 Pfam Heavy-metal-associated domain 56 116 IPR006121 GO:0046872
Bisa04g2133 1007 Pfam Heavy-metal-associated domain 140 200 IPR006121 GO:0046872
Bisa04g2133 1007 Pfam haloacid dehalogenase-like hydrolase 655 893 - -
Bisa04g2133 1007 SUPERFAMILY Calcium ATPase, transmembrane domain M 392 968 IPR023298 -
Bisa04g2133 1007 SUPERFAMILY HAD-like 658 985 IPR036412 -
Bisa04g2133 1007 CDD HMA 139 200 IPR006121 GO:0046872
Bisa04g2133 1007 MobiDBLite consensus disorder prediction 1 23 - -
Bisa04g2133 1007 FunFam Copper-transporting ATPase RAN1 666 758 - -
Bisa04g2133 1007 FunFam Probable copper-transporting ATPase HMA5 769 936 - -
Bisa04g2133 1007 NCBIfam heavy metal translocating P-type ATPase 373 988 IPR027256 GO:0006812|GO:0016020|GO:0019829
Bisa04g2133 1007 Pfam E1-E2 ATPase 442 638 - -
Bisa04g2133 1007 Gene3D - 427 549 - -
Bisa04g2133 1007 FunFam Copper-exporting P-type ATPase A 51 120 - -
Bisa04g2133 1007 SUPERFAMILY HMA, heavy metal-associated domain 136 207 IPR036163 GO:0046872
Bisa04g2133 1007 PRINTS Copper-transporting ATPase 1 signature 79 102 - -
Bisa04g2133 1007 PRINTS Copper-transporting ATPase 1 signature 53 78 - -
Bisa04g2133 1007 PRINTS Copper-transporting ATPase 1 signature 108 128 - -
Bisa04g2133 1007 NCBIfam copper ion binding protein 139 200 IPR006122 GO:0005507
Bisa04g2133 1007 NCBIfam copper ion binding protein 55 117 IPR006122 GO:0005507
Bisa04g2133 1007 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 45 1003 - -
Bisa04g2133 1007 ProSiteProfiles Heavy-metal-associated domain profile. 136 202 IPR006121 GO:0046872
Bisa04g2133 1007 SFLD p-type atpase 641 931 IPR044492 -
Bisa04g2133 1007 CDD P-type_ATPase_Cu-like 300 975 - -
Bisa04g2133 1007 Gene3D - 759 810 IPR023299 GO:0000166
Bisa04g2133 1007 Gene3D - 666 758 IPR023299 GO:0000166
Bisa04g2133 1007 FunFam Copper-exporting P-type ATPase 759 810 - -
Bisa04g2133 1007 NCBIfam HAD-IC family P-type ATPase 412 683 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa04g2133 1007 NCBIfam HAD-IC family P-type ATPase 758 960 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa04g2133 1007 SFLD Haloacid Dehalogenase 641 931 - -
Bisa04g2133 1007 ProSitePatterns E1-E2 ATPases phosphorylation site. 661 667 IPR018303 -
Bisa04g2133 1007 FunFam Copper-transporting ATPase 1, putative 427 549 - -
Bisa04g2133 1007 SUPERFAMILY HMA, heavy metal-associated domain 54 122 IPR036163 GO:0046872
Bisa04g2133 1007 ProSitePatterns Heavy-metal-associated domain. 58 88 IPR017969 GO:0046872
Bisa04g2133 1007 PRINTS P-type cation-transporting ATPase superfamily signature 804 815 - -
Bisa04g2133 1007 PRINTS P-type cation-transporting ATPase superfamily signature 879 898 - -
Bisa04g2133 1007 PRINTS P-type cation-transporting ATPase superfamily signature 495 509 - -
Bisa04g2133 1007 PRINTS P-type cation-transporting ATPase superfamily signature 902 914 - -
Bisa04g2133 1007 PRINTS P-type cation-transporting ATPase superfamily signature 659 673 - -
Bisa04g2133 1007 PRINTS P-type cation-transporting ATPase superfamily signature 826 836 - -
Bisa04g2133 1007 SUPERFAMILY Calcium ATPase, transduction domain A 459 545 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2133 Bisa-ChrBisa04 68184017 68191446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2133 1 1005 Primary Pumps ATPases AT5G44790 74.630 0.0 1488