Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2119 ATGCTGGTTGTCATCAGAATAATCCACTGGAGATATGTCCATCTCAAGATACATGAAGACCTTGCAGCCAATTTTTTGTTTGAGAATTATAGGAAAACTAGTATTTCTCATTTGATACCGCAAGCTTATTGTGTTAATATCAAATTTGCAAATAATATCCCTTTTCGTTACTGCCAAACCCAAATTCCTCCCTCCTTCTCCATAGCTCCTCCATCCATGGCTGAACCTCACTCTCCTTCTTCCTCTCCCTGCGCTCGCGAACCCTACGCCTTCAATCTCATGGTCGTCGTCGCCGCCATCATCTGCGCCCTCCTCTGCGCCCTTGGCCTCAACACCATGCTCCACTGCGTCTTCCAATGCGCCGTCACCGAGCCTCTCCAGTGGATCGCCTCTCGCCGCCTCAATTCCGGCCTCAAGAAGAAGGACATGGTGGCTCTGCCTACTTCCACTTATTGCAGTACTAACACTAATACCGATTCCTCTTCTAATTCCTCGTCTTCTTCGGGTTCTGCGTCGACGAATTGTGCGATTTGCTTAGCGGATTTCAGCGACGGCGATAGGATCAGGTTTCTCCCAAAGTGTAACCATAGGTTTCATGTGGATTGTATTGATAAGTGGCTGATTTCGCATTCTTCTTGCCCTACTTGCCGCCATTTTCTCAAGTCCAGTGATTCACTTCACTCCTTGCATATTCTCATCACATAG 705 0.4752 MLVVIRIIHWRYVHLKIHEDLAANFLFENYRKTSISHLIPQAYCVNIKFANNIPFRYCQTQIPPSFSIAPPSMAEPHSPSSSPCAREPYAFNLMVVVAAIICALLCALGLNTMLHCVFQCAVTEPLQWIASRRLNSGLKKKDMVALPTSTYCSTNTNTDSSSNSSSSSGSASTNCAICLADFSDGDRIRFLPKCNHRFHVDCIDKWLISHSSCPTCRHFLKSSDSLHSLHILIT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2119 234 SMART ring_2 175 216 IPR001841 -
Bisa04g2119 234 ProSiteProfiles Zinc finger RING-type profile. 175 217 IPR001841 -
Bisa04g2119 234 Pfam Ring finger domain 174 217 IPR001841 -
Bisa04g2119 234 CDD RING-H2_EL5-like 175 217 - -
Bisa04g2119 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 222 IPR013083 -
Bisa04g2119 234 SUPERFAMILY RING/U-box 174 223 - -
Bisa04g2119 234 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 83 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2119 Bisa-ChrBisa04 68041823 68048410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2119 72 220 C3H Transcription Factor Family AT2G17450 43.624 4.63e-34 119