Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2092 ATGATGGTGAATTTTGACATGGGAGTTGGTGGGAGTGAGCAAGACCCTAATAACTCTCGCAAGGGAAAAAGGACCTACAATCGTCACACTCCCTATCAGATAGCACAACTTGATGCATTTTTCAAGGAGTGCCCACATCCGGATGAACACCAAAGGTGCCAACTAGGCAGGGAGCTTGGGCTTGAGCCAAGACAAGTAAAGTTTTGGTTTCAGAATAAGAGAACTCAAACAAAGGTGGTCTATGGTCTAATTTCTTTGTCTGATACTTCTTTCAAGACTCAAAATGAGCGAGCAGGTAACTCTATGCTTCGGGCTGAAAATGAAAGGATGCAGTGTGAAAACCTAGCTTTCAGAGAGGCACTGAAGAACATAACCTGCTCATCTTGTGGGGGTCCACCCGATGGGGAAGAAGAGCTCCAGCGTCATCTGCAGAAGCTGCAGCAAGAAAATATTCAACTAAAACAAGAGTTTGAGAGAGTATCAAACATTCTTGCAAGGTACCTTGGCAAACCGATATCAGATCTAGAGCTGATGGTCCCTGCTTTAGGATTTTCATTGGATCTGTCACCAAGAAGTTCCCTACACCAAGGGATCAGAAGTCCTAGTGTAGATATTGGCTCAGCTCTTTCAATTTCTAATGATGATATGTTGCCAACCTATATGGGAGAAGTTACAGATGTAGAAAAGACGTTAATGTTACATGCTGCTCGTAGCGCCATGGATGAATTAGTTAAGCTTCTCCGAATTGATGAGCCCTTATGGGTCAATTCTGCTTCTGATGGACAATCTGTTCTTCGTCGTGACAGTTATGAAAAGATATATCCTAAGGCTAATCACTTTAGAACTTCTACTACACGTGTAGAAGCATCAAAGGATTCACGTATAGTTCACATGAATGGAATTCAATTGGTTGACATGTTTTTGGATTCAGACAAATGGGTTTATTTTTTCCCGACAATTGTTATGAAAGCTCAAACAATTGAAGTGCTTGATGTTGGATCATTAGGAAACCGTTCTGAAGCCATGCAGTTGATGTATGAGGAAATGCACATTCTTTCACCTATGGTGCCACCTCGTGAATTCTGCTTTATTCGCTACTGTCGACTAATTGAAGTAGGTGTGTGGGTAATAGTGGATGTGTCATTTGATTCCCTAAGAGATGACGTCCCTCTTTCTCGCACTTGGAAGTTTCCTTCTGGTTGCATGATTTGTGAAATGCCCAATGGGTTCTCCAAGGTTACATGGATTGAACATGTGGAAGTGGATGATAAAACCCAAACTCACCGGCTATATAGAGATCTTGTTTGTGGAAATTTTGCATATGGAGCAGAAAGATGGGTTGTGACGCTTCAAAGAATGTGTGAAAGATTTGCATACGGCTTGGATGTAAATATATCTCTTGAAGAGGCTCGTGGAGTAATCAGTTTAGCTGAAGGAAGGAGGGCCATCATGAAACTTGCTCATCGAATGGTTAAGGACTTTTGTGGAGTTTTAAAAATGTCAGGTAAGATGGACTTCCCTCATTTATCTGAGGCGACTAATAGTGGGGTTAGGGTCTCTGTTCGGAAAAACACAGAACCAGGTCAGCCAGATGGCATGATTGTCAGTGCTGCTACCTCCCTTTGGCTTCCACTCCCGCCTCACACTGTTTTTGACTTCTTCAAAGATGAAAGAAGAAGAGTTCAGTGGGATATTCTTTCTTGTGGGAATCCTGAGCATGAAATTGCACACATCTCAAATGGAAGCCATCCCGGAAACTGTATATCAATTCTTCGGCCTTTCATTCCCACTGAGAACAACGTGCTGATTCTTCAAGAAACTTGCACAGATCCCTCAGGATCTTTAATTGTGTATGCTCCGCTTGATGTGCCATTGATAAACTTGGCTGAGAGGGGAGAAGACACTTCGATGATGCCAATTCTTCCATCAGGGTTTGTAATCTCCAGGGATGGCCGACCTAACCCTAACCTTACCCCAGTTGCTGGAGAAGGTAGCAGCTCAAATGCAGGTGGTTCGGGAGGAACTCTTCTGACTGTCGCTTTCCAGATATTGGTTTGCAGCTCAACAGCAATGAGGCAGTTGAACATGGAAACTGTGGCCACAGTCAACACACTCATAAGCTCCACTGTCCAGAAGATAAAGGTTGCTCTGGACTGTGCAGGTGCGGATTAA 2172 0.4342 MMVNFDMGVGGSEQDPNNSRKGKRTYNRHTPYQIAQLDAFFKECPHPDEHQRCQLGRELGLEPRQVKFWFQNKRTQTKVVYGLISLSDTSFKTQNERAGNSMLRAENERMQCENLAFREALKNITCSSCGGPPDGEEELQRHLQKLQQENIQLKQEFERVSNILARYLGKPISDLELMVPALGFSLDLSPRSSLHQGIRSPSVDIGSALSISNDDMLPTYMGEVTDVEKTLMLHAARSAMDELVKLLRIDEPLWVNSASDGQSVLRRDSYEKIYPKANHFRTSTTRVEASKDSRIVHMNGIQLVDMFLDSDKWVYFFPTIVMKAQTIEVLDVGSLGNRSEAMQLMYEEMHILSPMVPPREFCFIRYCRLIEVGVWVIVDVSFDSLRDDVPLSRTWKFPSGCMICEMPNGFSKVTWIEHVEVDDKTQTHRLYRDLVCGNFAYGAERWVVTLQRMCERFAYGLDVNISLEEARGVISLAEGRRAIMKLAHRMVKDFCGVLKMSGKMDFPHLSEATNSGVRVSVRKNTEPGQPDGMIVSAATSLWLPLPPHTVFDFFKDERRRVQWDILSCGNPEHEIAHISNGSHPGNCISILRPFIPTENNVLILQETCTDPSGSLIVYAPLDVPLINLAERGEDTSMMPILPSGFVISRDGRPNPNLTPVAGEGSSSNAGGSGGTLLTVAFQILVCSSTAMRQLNMETVATVNTLISSTVQKIKVALDCAGAD 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2092 723 SMART START_1 234 456 IPR002913 GO:0008289
Bisa04g2092 723 Gene3D - 234 430 IPR023393 -
Bisa04g2092 723 SUPERFAMILY Bet v1-like 226 458 - -
Bisa04g2092 723 Coils Coil 136 163 - -
Bisa04g2092 723 SUPERFAMILY Homeodomain-like 9 78 IPR009057 -
Bisa04g2092 723 CDD homeodomain 21 78 IPR001356 GO:0003677
Bisa04g2092 723 Pfam START domain 237 456 IPR002913 GO:0008289
Bisa04g2092 723 ProSiteProfiles 'Homeobox' domain profile. 20 80 IPR001356 GO:0003677
Bisa04g2092 723 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 21 717 IPR042160 -
Bisa04g2092 723 MobiDBLite consensus disorder prediction 1 26 - -
Bisa04g2092 723 Pfam Homeodomain 23 78 IPR001356 GO:0003677
Bisa04g2092 723 SUPERFAMILY Bet v1-like 512 711 - -
Bisa04g2092 723 ProSiteProfiles START domain profile. 225 459 IPR002913 GO:0008289
Bisa04g2092 723 SMART HOX_1 22 84 IPR001356 GO:0003677
Bisa04g2092 723 CDD START_ArGLABRA2_like 229 455 - -
Bisa04g2092 723 Gene3D - 10 81 - -
Bisa04g2092 723 FunFam Homeobox-leucine zipper protein HDG1 10 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2092 Bisa-ChrBisa04 67693849 67698153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2092 20 717 Homeobox Transcription Factor Family AT1G73360 47.034 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa04g2092 START 5.3e-35 CL0209