Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2083 ATGTTAGAGAGTGGTGGTGGTGGTGGTTGTGGTCGCGATTCCGAGCTTAGCTTTGAGGCTCTGAGTTCAACCCAGCGCAGTTCCATGAGCAGCGAGAGCATTTGCAGCACGAGTTTCAGCCGCCTCTCCTTCGAACTTCTCCCTACCTCGCCGGAGAGCCTCTCCCTCAAGCCACACCGGTCGTCGGACTTCGCCTACTCCGCCATCCGCTCCGCCACCTTCCGCCGCAAGACCGGCCTCACCTTCCGTGACTTCCACCTCCTCCGTCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTTCGCAATAACAGCAACGGCGCCGCCGACGATGATCGGTTTGTCGCCGACGTGGAAGACGTCATCGTCAACGACGACGACGACTTTGGCTGCTTCTACGCCATGAAAGTGGTGGACAAGGAGGCGGTGGCTCTGAAGAAGAAGGCCGAGAGAGCGGAGACGGAGAGGAAGATCCTGAAGATGCTGGACCATCCGTTCCTCCCTACGCTCTACGCCGAGTTCGAGGCTTCACATTTCTCTTGCATTGTCATGGAGTTTTGTTCCGGTGGTGACTTGCACTCCCTGCGCCATAGACAGCCTCAGAAGCGCTTCTCTCTCACCTCTGCTAGGTTTTATGCTGCTGAAGTTCTCGTGGCATTAGAGTACCTCCACATGCTGGGAATCATATACAGAGATCTGAAACCTGAAAACGTGTTGGTTAGATCCGACGGCCACATCATGCTCTCAGATTTTGATCTCTCGATGTGTTCAGATGCAATCCCAGCCGTTGAATCCCCTGACTTCTCTACGAATCCTGTGTTCCCAGACGCGTTACCGTACGACCGCCCGCACTCCGGCCCATTCTCCTGCCTCCCGAACAGGGTCTTCCGGTCCCGTAAGGTCCAAACCCTTCAACCGAACCGGCTCTTCGTGGCTGAACCGGTGTCCGCCCGGTCCTGCTCCTTCGTCGGGACTCACGAGTACGTCTCGCCGGAAGTCGCCTCAGGCAACTCCCACGGGAACGCCGTCGACTGGTGGTCCTACGGGATATTCCTCTACGAGCTCATTTACGGTCGGACGCCGTTCGCATCCCCATCGAACGAGGCTACGCTGCGAAGCATCATAAAGAAGCCCCTCACATTCCCTACCCCCACGCCCTCCAGCTCGCTTGAGCTCCACGCGCGGGACCTGATATCCAGGTTGTTGAACAAGGACCCGACTCGGAGACTCGGGTCGAAGCGTGGCGCGGCGGACGTGAAGAAACACCCCTTCTTCAAAGGCCTGAACTTGGCGTTGATAAGGATGATGACGCCGCCGGAAGTGCCCGGGTTGAGAAGACAGAAAACGACGCCGTTATGCCATGCCAAGGGAAGCAAGAGTAAAACCGGCGGGAGACCGCAGATTCAGACAACGGCGTCGTTTGATTACTTCTGA 1443 0.5787 MLESGGGGGCGRDSELSFEALSSTQRSSMSSESICSTSFSRLSFELLPTSPESLSLKPHRSSDFAYSAIRSATFRRKTGLTFRDFHLLRRIGAGDIGTVYLCRLRNNSNGAADDDRFVADVEDVIVNDDDDFGCFYAMKVVDKEAVALKKKAERAETERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHRQPQKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSDAIPAVESPDFSTNPVFPDALPYDRPHSGPFSCLPNRVFRSRKVQTLQPNRLFVAEPVSARSCSFVGTHEYVSPEVASGNSHGNAVDWWSYGIFLYELIYGRTPFASPSNEATLRSIIKKPLTFPTPTPSSSLELHARDLISRLLNKDPTRRLGSKRGAADVKKHPFFKGLNLALIRMMTPPEVPGLRRQKTTPLCHAKGSKSKTGGRPQIQTTASFDYF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2083 480 Gene3D Transferase(Phosphotransferase) domain 1 321 446 - -
Bisa04g2083 480 Pfam Protein kinase domain 132 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2083 480 Pfam Protein kinase domain 322 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2083 480 MobiDBLite consensus disorder prediction 457 480 - -
Bisa04g2083 480 FunFam serine/threonine-protein kinase D6PK-like 320 446 - -
Bisa04g2083 480 PANTHER FLIPPASE KINASE 1-RELATED 25 448 - -
Bisa04g2083 480 MobiDBLite consensus disorder prediction 465 480 - -
Bisa04g2083 480 Gene3D Transferase(Phosphotransferase) domain 1 190 258 - -
Bisa04g2083 480 Coils Coil 138 165 - -
Bisa04g2083 480 FunFam protein kinase PINOID 190 258 - -
Bisa04g2083 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Bisa04g2083 480 SUPERFAMILY Protein kinase-like (PK-like) 64 445 IPR011009 -
Bisa04g2083 480 SMART serkin_6 85 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2083 480 Gene3D Phosphorylase Kinase; domain 1 83 189 - -
Bisa04g2083 480 ProSiteProfiles Protein kinase domain profile. 85 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2083 Bisa-ChrBisa04 67523838 67525806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2083 13 480 AGC Kinase Gene Family AT2G34650 63.425 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa04g2083 Pkinase 5.4e-30 CL0016