Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2062 ATGAGACTCTCTTCAGCTGGTTTTAGTCCTTCACCCCCTGAAGGAGAAAGGCGAGTTCTTGATTCAGAACTTTGGCATGCATGTGCCGGCCCTCTTGTTTCTTTGCCGGCAGTTGGAAGCCGCGTTGTCTACTTTCCTCAGGGTCACAGTGAACAGGTTGCTGCATCAACCAACAAGGAGGTGGATGCTCATATCCCCAACTACCCAAGTTTACCTCCCCAACTAATTTGTCAACTTCATAATGTGACGATGCATGCTGATGCTGAAACGGATGAAGTTTATGCACAGATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGATGCATATCTTCCTGCACAGTTGGGCACTCAGAGTAAACAGCCAACAAACTACTTTTGCAAAACTTTGACTGCCAGTGATACAAGCACTCATGGGGGATTTTCTGTTCCTCGTCGAGCAGCCGAGAAAGTGTTTCCCCCATTGGACTTCAGTCAACAGCCTCCTGCTCAAGAATTAATTGCAAGGGATTTGCACGGTAATGAATGGAAATTCAGACATATATTCCGAGGCCAGCCTAAAAGACATCTACTTACAACAGGATGGAGTGTTTTTGTGAGTGCTAAGAGACTTGTTGCTGGTGACTCTGTGCTGTTTATCTGGAATGAAAAGAATCAATTGCTTCTCGGTATTAGACGTGCTAATCGACCACAAACAGTGATGCCTTCTTCAGTGCTATCAAGCGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAACAGTCGTTTCACCATTTTCTATAACCCACGTGCTAGCCCTTCAGAATTTGTCATACCCTTGGCAAAGTTTGTTAAAGCTGTGTATCACACTCGAGTTTCAGTTGGCATGCGCTTCCGGATGCTGTTTGAAACGGAGGAATCAAGTGTGCGACGATACATGGGCACAATAACTGGAATTTGTGACTTGGATCCCATTCGGTGGCCGAATTCACATTGGCGCTCAGTTAAGGTTGGCTGGGATGAATCCACAGCAGGGGACAGGCAACCTAGGGTTTCCCTGTGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCTTCTCCATTCCCTCTTAGGCTTAAACGACCATGGCCGCCAGGACTGCCTTCTTTCCATGGCATGAAGGATGAAGATTTGGGCATAAGTTCACCACTGTTGTGGGATAGAGGGCTTCAGTCTCTTAATTTTCAGGGAATTGGGGTTAGTCCTTGGATGCAGCCTAGGCTTGATCACTCCATTCTGAATTTCCAAACAGACATGTACCAAGCCATGGCTGCTGCTGCACTTCAGGATATTAGGACCATCGATCCTTCCAAACAGCATGCAGCAGCCCTCCTTCAATTTCAGCAACCCCAAAACTTCCCCAACAGGACTGCTGCTTTAATGCAAGCCCAGATGATGCAGCCGTCTCAACCTCAGCAAGCTTTTCCAACTAATCAAGAGAATCAGCATTCATCTCAATCTGATGCTCAAACTCAGACTCATCTTCAGAGTCAACACTCTTTTGTTAACCAGCACCATCAGCAGCAACAACAGCAGCAGCAGCAGCATCAGAGTTTTTCTGATCAGCAGATTTCGAGCGGTGTCTCTACAATGTCTCAGTTTGTTTCGGCACCTCAGTCCCAATCACCACCCATGCAAGCTATCTCTTCGCTGTGCCAACAGCAAAGTTTTTCTGATTCAAACGGGAATGCTGTGACTACTGGTATGGTTTCCCCCCTGCATAGTATCTTGGGTTCGTTTCCCCAGGATGACACATCCCACCTTCTCAACCTTACGAGGACAAGCTCTTGGGTACCTGTTCAATCTTCCACTACTGCCTGGCCCTCCAAGCGTGTTGCAGTGGATCCTCTGCTCTCTTCTGGAGCTTCTCAATGTGTATTGCCTCCAATGGATCAGCTAGGGCAGCGCCAGAGTACTATGTCTCAAAATGCAGTTACATTGCCACCTTTTCCTGGCAGGGAGTGCTCCATAGACCAAGGGAACACCGATCCACATAGCCATCTTTTGTTTGGTGTTAATATAGAGCCATCGACTCTTCTAGTGCCGAATGGGTTGTCAAGCCTTAAGGGGGTGGGCAGCAACTGTGACTCCACAACCATACCTTTTCAATCCTCTAATTACCTGAATACCCCAACCACTGAATCTACATTGAGTCCTGGGATGACACAAAGCATTGGTGAATCAGGCTTCTTGCAGGCCTCGGAAAATTTGGGCCAAGGAAACTCGCCAAATAAAACCTTTGTAAAGGTTTACAAGTCAGGGACCTTTGGAAGATCATTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGGAGCGAACTTGCCCGCCTTTTTGGCCTTGAGGGCGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCCTGGCCGGAATTCGTCAATAGTGTATGGTGTATTAAGATACTTTCCCCACAAGAAGTGCAACAAATGGGCAACAACGGCCTTGAGCTTCTGAACTCAGTTCCCATTCAAAGACTCTCTAATGGCATCTGTGAAGACTACGTGAACCGGCAGGATCCAAGAAGTATGAACAGCGGGATAACAACTGTGGGGTCGCTAGACTACTGA 2679 0.4744 MRLSSAGFSPSPPEGERRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLNPQEQKDAYLPAQLGTQSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKFVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPIRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDEDLGISSPLLWDRGLQSLNFQGIGVSPWMQPRLDHSILNFQTDMYQAMAAAALQDIRTIDPSKQHAAALLQFQQPQNFPNRTAALMQAQMMQPSQPQQAFPTNQENQHSSQSDAQTQTHLQSQHSFVNQHHQQQQQQQQQHQSFSDQQISSGVSTMSQFVSAPQSQSPPMQAISSLCQQQSFSDSNGNAVTTGMVSPLHSILGSFPQDDTSHLLNLTRTSSWVPVQSSTTAWPSKRVAVDPLLSSGASQCVLPPMDQLGQRQSTMSQNAVTLPPFPGRECSIDQGNTDPHSHLLFGVNIEPSTLLVPNGLSSLKGVGSNCDSTTIPFQSSNYLNTPTTESTLSPGMTQSIGESGFLQASENLGQGNSPNKTFVKVYKSGTFGRSLDITKFSSYHELRSELARLFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGICEDYVNRQDPRSMNSGITTVGSLDY 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2062 892 FunFam Auxin response factor 125 229 - -
Bisa04g2062 892 FunFam Auxin response factor 754 848 - -
Bisa04g2062 892 Gene3D - 125 228 IPR015300 -
Bisa04g2062 892 SUPERFAMILY CAD & PB1 domains 753 834 - -
Bisa04g2062 892 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Bisa04g2062 892 FunFam Auxin response factor 291 363 - -
Bisa04g2062 892 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa04g2062 892 ProSiteProfiles PB1 domain profile. 759 843 IPR000270 GO:0005515
Bisa04g2062 892 MobiDBLite consensus disorder prediction 477 558 - -
Bisa04g2062 892 Gene3D - 291 363 - -
Bisa04g2062 892 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 848 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa04g2062 892 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Bisa04g2062 892 CDD B3_DNA 126 227 IPR003340 GO:0003677
Bisa04g2062 892 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Bisa04g2062 892 Gene3D - 755 848 - -
Bisa04g2062 892 SMART B3_2 127 229 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2062 Bisa-ChrBisa04 67155369 67160947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2062 97 851 B3 DNA Binding Superfamily AT5G37020 52.558 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa04g2062 B3 1.8e-22 CL0405