Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2049 ATGGGCAAATTTCATTTCTCTATTTTAATGTTCTCACTGCATTACTTCATGGCTCTCTTAGCTTGGAGTAAGACGGATATTACCACGGATACATCTGCACTTCTTGCTTTCAAATCTTCCATCACCTTTGATCCAAACAATTTCTTAGCCAATTGGTCTGTTTCTTCTTCTCCATGTACTTGGGTTGGTGTCACTTGCAATACTCATCATGGAAGGGTTCATTCCTTGAATCTTAGAAACATGGGTCTCAAAGGCAACATATCTTCACAATTGGGAAATCTCTCATTTCTTGTTGAGCTTGATCTTAGTGAAAACAATTTTCATGGTCACATGCCAAAAGAGTTAGTTCAACTGCGTAGATTGAAACTACTCAACTTGGGCTACAATGAATTTAATGGAGAAGTTCCCACATGGATAGGGGAGTTATCTTCACTTCAACATTTGAATCTATTCAATAATAGTTTTACTGGGTTTATTCCATTATCTGTATCTAACTTGTCAAGGTTGGAGACCATAGATTGGAGAGTTAATTTTATCGAGGGAACAATTCCACTTGAGATTGGAAGACTTAAGCACTTGAAGATTTTAAGAATTGCGTTCAATAAGCTTTCAGGAAATATACCACACATATTTTTCAACTTAACTTCACTTGAAATATTGAGTCTTTCTTTGAACACTTTATCAGTGATTCATTGTGATGTAAAGCCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGCATTGCTAAGTTGTTAGGCAAAGGGCAGCTAGAAATTTATACGAGGACTTTAGCTACAATAGGCTATATTGCACCAGAGTATGGATCGAAAGGAGTTGTTTCCATTAAAGGAGATGTGTATAGTTATGGTATTATGCTGATTGAAATATTTACAAGAAAGAAGCCAACAGATGACATGTTTGTTCAAGGTCTAACTTTGAAAGACTGGGTTAGCAAATCATTACCACATGCACTAACCCATGTTTTGGATCCCAACTTGTTGCAAAGAGACAATCAAAGCATTGATAATATATTATCCCATATATCATCAATTTTCAAGTTAGCCTTGAGTTGTTGCACTGATTTACCTGATACACGGATCAATATGACAAGTGTTGTGGTGTCATTGAAAAGAATCAAGGCCACGTTTATGCAAAGTGGTATATAA 1185 0.3603 MGKFHFSILMFSLHYFMALLAWSKTDITTDTSALLAFKSSITFDPNNFLANWSVSSSPCTWVGVTCNTHHGRVHSLNLRNMGLKGNISSQLGNLSFLVELDLSENNFHGHMPKELVQLRRLKLLNLGYNEFNGEVPTWIGELSSLQHLNLFNNSFTGFIPLSVSNLSRLETIDWRVNFIEGTIPLEIGRLKHLKILRIAFNKLSGNIPHIFFNLTSLEILSLSLNTLSVIHCDVKPSNVLLDEDMVAHLSDFGIAKLLGKGQLEIYTRTLATIGYIAPEYGSKGVVSIKGDVYSYGIMLIEIFTRKKPTDDMFVQGLTLKDWVSKSLPHALTHVLDPNLLQRDNQSIDNILSHISSIFKLALSCCTDLPDTRINMTSVVVSLKRIKATFMQSGI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2049 394 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 229 387 - -
Bisa04g2049 394 ProSiteProfiles Protein kinase domain profile. 85 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2049 394 SUPERFAMILY Protein kinase-like (PK-like) 224 386 IPR011009 -
Bisa04g2049 394 Gene3D Transferase(Phosphotransferase) domain 1 217 392 - -
Bisa04g2049 394 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 215 393 - -
Bisa04g2049 394 SMART serkin_6 150 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2049 394 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 29 137 - -
Bisa04g2049 394 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Bisa04g2049 394 FunFam Piriformospora indica-insensitive protein 2 138 231 - -
Bisa04g2049 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Bisa04g2049 394 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Bisa04g2049 394 Gene3D Ribonuclease Inhibitor 138 189 IPR032675 -
Bisa04g2049 394 Pfam Protein kinase domain 227 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2049 394 SUPERFAMILY L domain-like 28 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2049 Bisa-ChrBisa04 66690254 66699141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2049 229 392 Receptor kinase-like Gene Family AT5G20480 39.412 1.60e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa04g2049 Pkinase 1.3e-20 CL0016