Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2045 ATGAATTCATTTACGGGTTTTATACCAAAGGACATAGGCAATCTTAGTAAAGTTGAGGAATTAATTTTGGGAATTAATTATTTGAGTGGACCTATTCCTTCTAATATTTTCAACATTTCAGCATTGAGGAGATTGTATCTCAATCAAAATTCCTTCAATGGCCTTCTCCCATCAAACATAGGAAGTGGCCTTCCTAACCTAGTTGAACTAGCACTGGCTGCAAATGAATTTACAGGGAAACTCCCAAGGAGCATATTCAATGCTTCTAAGCTCAGTATTTTGGATCTACAACAAAATAAATTTAATGGAGCTATTCCTAATACACTTGAAATTTTGATCAACTTGATCAGCTTAGATTTACATATGAATGATTTGAACGGGACCTTACCTATTACAATGAACAAATTGCAAAGCCTTCAATATTTGGATCTCAGTTATAACAAATTGCAAGGCATCATAATAGATGAACTTTGCCAAATCAAAAGTTTGAGTGAGTTGTATCTATCCAATAACATGTTTTCGGGATGGGTGCCAGCATGTCTTGGGAATCTTACTTTCTTGAGAAAGCTAAACTTGAGTTCTAACAAATTGATTTCTCATATACCCTCTTCTATTTGGAGTCTCAAAGATATTTTGCAAATAAACTTATCCTCCAATGCATTGAGTGGAAAAATTCCACTTGAAATTTCAAACTTAAGGGTCCTTATATTGTTGGACTTGTCAATAAATCAAATCTCAGGTAACATTCCTACAACTATTGGTGATTTGCAAACTTTGCAAAGGCTATCCTTAGCTCATAACAAATTGCAAGGGCCTATACCAGAATCAAATGGCAAGATGACTAGTTTAGATTTCTTGGACCTTTCAAGAAATAATTTGTCTAGTGTGATTCCAAAATCCTTCGAGTCACTTCTCTATCTTAATTATCTTAATCTTTCTTACAATGACTTGCATGGAGAGATTCCAGATGGTGGCCCTTTCAAAAAGTTTACATTTGAATCTTTTATGATGAATGAAGGTCTTTGTGGGAATCCTAAACTACAAGTCAAACCATGTAGAAAAGGAATCAAACATAGATCAACTAAAGAGATGCTTTTGCTCAAGTGCTTGTTGCCTATCATTGTGGCAATCATTTTTATTGTTTCATGCATATTCTTTCTAAAACATAAGCAAGATTATGTTGGTGAATCAACCAGTCGAGATTTAGTAGATTTGGAGACACCAATTAGGATACCCTACTATGAACTTCTTCAAGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCAGGGGTAGTTTTGGATCAGTATACAAAGGTGTTCTTTCAAGTGGAAAGACAATTGCAGTTAAAGTATTTAATCTAGACTTGGAAGAAGCATTAAGAAGCTTTGATACTGAATGTGGTGCAATGTGCAACTTGCGTCATCGTAATCTCATTAAGATCATAAGTAGTTGTTCAAATGTTGATTTTAAATCTATAATAATGGAATTTATGCCAAATGGGAGTCTTGATAGATGGTTGTATTCTCATAACTACTGCTTAGATATCTTGCAAAGACTGAACATAATGATTGATGTGGCATCAGCATTGGAGTATCTTCATCATGGTTCTTCAATTCCAGTGGTTCATTGTGATGTAAAGCCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCCCATCTTGGTGATTTTGGCATTGCCAAACTGTTGGGTGAAGGCCAGCTAGAAATTTATACAAAGACTTTAGCTACATTGGGGTATATTGCACCAGAGTATGCATCAGAAGGAGTTGTTTCCACTAAAGGAGATGTGTACAGCTATGGTATTATGCTGATCGAAATTTTTACAAGAAGGAAGCCAATAGATGATATGTTTATTCAAGGTCTAAGCTTGAAAGATTGGGTTAGCAAATCAACACCACATGCAATAACTCATATTTTAGATCCCAATTTGTTGCAAGGAGATCGACAAAGCATTGGTAATATATCATTACCTTTATCATCAATTTTTGAGTTAGCCTTGAATTGTTGCACTGATTCACCTGATACACGAATTAACATGACAAATGTCGTGGTTTCATTGAAAAAGATCAAGGTTGTGTTTATGCAAAGTGGTAGAGGCACCCTGAGTATGATTAACTATTGA 2148 0.3506 MNSFTGFIPKDIGNLSKVEELILGINYLSGPIPSNIFNISALRRLYLNQNSFNGLLPSNIGSGLPNLVELALAANEFTGKLPRSIFNASKLSILDLQQNKFNGAIPNTLEILINLISLDLHMNDLNGTLPITMNKLQSLQYLDLSYNKLQGIIIDELCQIKSLSELYLSNNMFSGWVPACLGNLTFLRKLNLSSNKLISHIPSSIWSLKDILQINLSSNALSGKIPLEISNLRVLILLDLSINQISGNIPTTIGDLQTLQRLSLAHNKLQGPIPESNGKMTSLDFLDLSRNNLSSVIPKSFESLLYLNYLNLSYNDLHGEIPDGGPFKKFTFESFMMNEGLCGNPKLQVKPCRKGIKHRSTKEMLLLKCLLPIIVAIIFIVSCIFFLKHKQDYVGESTSRDLVDLETPIRIPYYELLQGTNGFDESNLLGRGSFGSVYKGVLSSGKTIAVKVFNLDLEEALRSFDTECGAMCNLRHRNLIKIISSCSNVDFKSIIMEFMPNGSLDRWLYSHNYCLDILQRLNIMIDVASALEYLHHGSSIPVVHCDVKPSNVLLDEDMVAHLGDFGIAKLLGEGQLEIYTKTLATLGYIAPEYASEGVVSTKGDVYSYGIMLIEIFTRRKPIDDMFIQGLSLKDWVSKSTPHAITHILDPNLLQGDRQSIGNISLPLSSIFELALNCCTDSPDTRINMTNVVVSLKKIKVVFMQSGRGTLSMINY 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2045 715 SUPERFAMILY L domain-like 2 347 - -
Bisa04g2045 715 PRINTS Leucine-rich repeat signature 139 152 - -
Bisa04g2045 715 PRINTS Leucine-rich repeat signature 280 293 - -
Bisa04g2045 715 PANTHER OS04G0122200 PROTEIN 103 701 - -
Bisa04g2045 715 ProSiteProfiles Protein kinase domain profile. 423 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2045 715 ProSitePatterns Protein kinases ATP-binding region signature. 429 451 IPR017441 GO:0005524
Bisa04g2045 715 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Bisa04g2045 715 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Bisa04g2045 715 Gene3D Transferase(Phosphotransferase) domain 1 499 706 - -
Bisa04g2045 715 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 152 - -
Bisa04g2045 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Bisa04g2045 715 ProSiteProfiles Leucine-rich repeat profile. 282 303 IPR001611 GO:0005515
Bisa04g2045 715 ProSiteProfiles Leucine-rich repeat profile. 138 159 IPR001611 GO:0005515
Bisa04g2045 715 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 499 707 - -
Bisa04g2045 715 Pfam Protein kinase domain 424 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2045 715 SMART LRR_typ_2 136 159 IPR003591 -
Bisa04g2045 715 SMART LRR_typ_2 39 63 IPR003591 -
Bisa04g2045 715 SMART LRR_typ_2 64 88 IPR003591 -
Bisa04g2045 715 SMART LRR_typ_2 184 208 IPR003591 -
Bisa04g2045 715 SMART LRR_typ_2 232 256 IPR003591 -
Bisa04g2045 715 SMART LRR_typ_2 160 183 IPR003591 -
Bisa04g2045 715 SMART LRR_typ_2 280 303 IPR003591 -
Bisa04g2045 715 SMART serkin_6 423 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2045 715 Gene3D Phosphorylase Kinase; domain 1 388 498 - -
Bisa04g2045 715 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 153 355 - -
Bisa04g2045 715 FunFam Serine-threonine protein kinase plant-type 404 498 - -
Bisa04g2045 715 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Bisa04g2045 715 Gene3D Ribonuclease Inhibitor 2 353 IPR032675 -
Bisa04g2045 715 SUPERFAMILY Protein kinase-like (PK-like) 405 695 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2045 Bisa-ChrBisa04 65879162 65887175 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2045 2 709 Receptor kinase-like Gene Family AT3G47570 38.019 1.70e-141 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa04g2045 Pkinase 3.1e-45 CL0016