Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2042 ATGACATGGCCAGGTCGATGTTCATCCGGCTTTGTACCAAAGGAGATAGGCATTCTTGGTAAACTTGAGGTATTAGATTTGGGAGATAACTATTTGAGTGGACTTGTTCCTCCAAATATTTTCAACATTTCAACATTGACATTGTTGTCTCTTGCAAATAATTTCTTCCATGGCCTTCTCCCATTAAACATAGGAAGTGGCGTTCCCAACCTAATATATTTGGAACTGGAAGAAAATGAATTTATAGGAGAACTCCCAAAGAGCATATCTAATGCTTCTAAGCTCACTTTTTTGGATTTGTGGCACAATAAATTTAATGGAGCTATTCCCAATGCACTTAAAAATTTGACCAACTTGATCAAATTAGATTTACATGGGAATGATTTGAATGGGACTGTTCCTACTACAATGAACGAATTGCAAAGCCTTCAATATTTGGATCTTAGTTATAACAAATTGCAAGGCATCATAATAGAAGAAATTTGCCAAATTAAAAGTTTGGAGGAGTTGGATCTATCCAATAACATGTTTACGAATCGGGTGCCATCGTGTCTTGGGAATCTTACTTCCTTGAGAAATTTGAACTTGGGCTTTAATAAATTGATTTCTCATATACCCTTTTCACTTTGGAGTCTCAAAGATATTTTGCTCATAAACTTCTCCTCCAATGCTTTGAGTGGAAAAATTCCACCTGAAATTTCGAACTTAAGGGCCCTTATACTGATGGACTTATCAAGAAATCAAATTTCAAAGAACATTCCTACAACTATTGGTGACTTGCAAACTTTGCAAAGTTTATCTTTAGCACATAACAAATTGCAAGGGGTTATTCCTGAATCATTTGGCAAGATGATTAACTTAGATTTCTTGGATCTTTCTCAAAATAATCTTTCTGGAGTGATTCCAAAATCCTTAGAGTCACTTCTCCATCTTAATTACCTTAATTTTTCATATAATTTCTTGCATGGAGAGATTCCAGATGGTGGCCCTTTCAAAAATTTTACAGCTGAATCTTTTATGATGAATGGAGGTCTTTGTGGGAATCCTAAACTCCGAGTCCAACCATGTAGAAAAGGAAACAAGCATAGATCAACTAAAGAGATGATTTTGCTCACGTCCTTGCTGCCTATCATTATGGCAACCATTTTGGTTGTTTCATGCATATTCTTTCTAAAACCCAAAAGAGATTATGTTGGTGATTCAACCAACCGAAATTTATTAGATTTGGAGACACCAGTTAAGATACCCTACTATGAACTTCTTCAGGGAACAAATGGATTTGATGAGAGTAACCTTCTTGGAACAGGCAGTTTTGGATCAGTATACAAAGGTATTCTTTCAAGTGGAAAGACAATTGCGGTTAAAGTATTTAATGTAGACTTGGAAGAAGCATTAAGAAGCTTTGATACTGAATGTGTTGCAATGCGCAACTTGCGTCATCGTAATCTCATTAAGATCATAAGTAGTTGTTCAAATGTTGATTTTAAATCTCTAATAATGGAATTTATGCCAAATGGGAGTCTTGATAGATGGTTGTATTCTCATAACTATTGCTTAGATATCTTGCAAAGGTTGAACATAATGATTGATGTGGCATCTGCATTGGAGTATCTCCATCATGGTTCTTCTATACCAGTGGTTCATTGTGATGTAAAGCCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGCATTGCTAAATTGTTAGGCGAAGGGCAGCTAGAAATTTATACAAAGACTTTAGCTACAATGGGCTATATTGCACCAGAATATGGATCGAAAGGAGTTGTTTCCATTAAAGGAGATGTGTATAGTTATGGTATCATGTTGATCGAAATATTTACAAGGAAGAAGCCAACAGACGACATGTTTGTTCAAGGTCTAAGTTTGAAAGACTGGGTTAGCAAATCATTACCAAATGCAATAATCCATGTTCTGGATCCCAATTTGGTGCAAAGAGATAGTCAAAGCATTGATAATATATCATCAATTTTCGAGTTAGCCTTGAGTTGTTGCACTGATTTACCTGATACACGAATTAATATGACAAGTGTTGTGTTGTCATTGAAAAGAATCAAGGCCATATTTATGCAAAGTGGAATATAA 2124 0.3545 MTWPGRCSSGFVPKEIGILGKLEVLDLGDNYLSGLVPPNIFNISTLTLLSLANNFFHGLLPLNIGSGVPNLIYLELEENEFIGELPKSISNASKLTFLDLWHNKFNGAIPNALKNLTNLIKLDLHGNDLNGTVPTTMNELQSLQYLDLSYNKLQGIIIEEICQIKSLEELDLSNNMFTNRVPSCLGNLTSLRNLNLGFNKLISHIPFSLWSLKDILLINFSSNALSGKIPPEISNLRALILMDLSRNQISKNIPTTIGDLQTLQSLSLAHNKLQGVIPESFGKMINLDFLDLSQNNLSGVIPKSLESLLHLNYLNFSYNFLHGEIPDGGPFKNFTAESFMMNGGLCGNPKLRVQPCRKGNKHRSTKEMILLTSLLPIIMATILVVSCIFFLKPKRDYVGDSTNRNLLDLETPVKIPYYELLQGTNGFDESNLLGTGSFGSVYKGILSSGKTIAVKVFNVDLEEALRSFDTECVAMRNLRHRNLIKIISSCSNVDFKSLIMEFMPNGSLDRWLYSHNYCLDILQRLNIMIDVASALEYLHHGSSIPVVHCDVKPSNVLLDEDMVAHLSDFGIAKLLGEGQLEIYTKTLATMGYIAPEYGSKGVVSIKGDVYSYGIMLIEIFTRKKPTDDMFVQGLSLKDWVSKSLPNAIIHVLDPNLVQRDSQSIDNISSIFELALSCCTDLPDTRINMTSVVLSLKRIKAIFMQSGI 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2042 707 SMART serkin_6 427 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2042 707 SUPERFAMILY Protein kinase-like (PK-like) 410 695 IPR011009 -
Bisa04g2042 707 PRINTS Leucine-rich repeat signature 164 177 - -
Bisa04g2042 707 PRINTS Leucine-rich repeat signature 143 156 - -
Bisa04g2042 707 SUPERFAMILY RNI-like 11 328 - -
Bisa04g2042 707 Gene3D Ribonuclease Inhibitor 6 357 IPR032675 -
Bisa04g2042 707 ProSiteProfiles Protein kinase domain profile. 427 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2042 707 Pfam Leucine Rich Repeat 166 188 IPR001611 GO:0005515
Bisa04g2042 707 Pfam Leucine Rich Repeat 21 40 IPR001611 GO:0005515
Bisa04g2042 707 Pfam Protein kinase domain 428 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2042 707 Gene3D Transferase(Phosphotransferase) domain 1 503 704 - -
Bisa04g2042 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Bisa04g2042 707 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 63 154 - -
Bisa04g2042 707 Gene3D Phosphorylase Kinase; domain 1 395 502 - -
Bisa04g2042 707 Pfam Leucine rich repeat 262 319 IPR001611 GO:0005515
Bisa04g2042 707 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Bisa04g2042 707 ProSiteProfiles Leucine-rich repeat profile. 142 163 IPR001611 GO:0005515
Bisa04g2042 707 ProSitePatterns Protein kinases ATP-binding region signature. 433 455 IPR017441 GO:0005524
Bisa04g2042 707 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 155 360 - -
Bisa04g2042 707 PANTHER OS04G0122200 PROTEIN 9 128 - -
Bisa04g2042 707 FunFam Serine-threonine protein kinase plant-type 408 502 - -
Bisa04g2042 707 SMART LRR_sd22_2 260 289 - -
Bisa04g2042 707 SMART LRR_sd22_2 19 45 - -
Bisa04g2042 707 SMART LRR_sd22_2 140 172 - -
Bisa04g2042 707 SMART LRR_sd22_2 188 204 - -
Bisa04g2042 707 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 503 706 - -
Bisa04g2042 707 SMART LRR_typ_2 116 140 IPR003591 -
Bisa04g2042 707 SMART LRR_typ_2 260 283 IPR003591 -
Bisa04g2042 707 SMART LRR_typ_2 164 187 IPR003591 -
Bisa04g2042 707 SMART LRR_typ_2 188 212 IPR003591 -
Bisa04g2042 707 SMART LRR_typ_2 19 43 IPR003591 -
Bisa04g2042 707 SMART LRR_typ_2 236 259 IPR003591 -
Bisa04g2042 707 SMART LRR_typ_2 284 307 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2042 Bisa-ChrBisa04 65333490 65336170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2042 9 705 Receptor kinase-like Gene Family AT3G47570 37.908 1.25e-143 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa04g2042 Pkinase 4.9e-45 CL0016