Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g2040 ATGACCTGCAAAGGGTTGGTAGACATCATATATACCGACAACTTGGAAGGTGAAATCCCTTCTTTTCTTTTCAACATGTCTTCTTTAAGAAATGTTGTCTTTGGCTCTAACTATTTACACGGTAATCTGCCACAAGATATGTGCAATAAACTTCCTTTACTTGAAATTTTCTCTATAACTGAAAATCAATTCGAGGGAAGCATTCCAAAATCAATTAGCAATTGCACATCATTGAAGATGTTATACTTGGGCGTAAATTCATTTACGGGTTTTGTACCAAAGGAGATAGGCATTTTTGGTAAACTTGAGCGATTAGATTTGGGATATAACTATTTGAGTGGACTTGTTCCTTCTAATATTTTCAACATTTCGACATTGACAATGTTGTCTCTTGCAAATAATTCCTTCCATGGTCTTCTCCCATCAAACATAGGAAGTGGCCTTCCCAACCTAATATTTTTGGTACTGGCAGAAAATGAATTTACAGGGAGACTCCCAAAGAGCATATTCAATGTTTCTAAGCTCCTTTTTTTGGATCTATGGAACAATAAATTCAATGGAGCTATTCCCAATGCACTTGAAAATTTGACCAACTTGCTTAGATTAGATTTACATGAGAATGATTTGAATGGGATAGTTCCTACTACAATGAACAAATTGCAAAGCCTTCAATATTTGGATCTTAGTTACAACAAATTGCAAGGCAACATTATAGAAGAAATTTGCCAAATCAAAAATTTGGAGGAGTTGTATCTATCCAATAACATGTTTTTTGGATGGGTGCCGGCGTGTGTTGGGAACCTTACTTCCTTGAGAAAACTAAACTTGGGCTCTAACAAACTGATTTCTCATATACCTTCTTCACTTTGGAGTCTCAGAGATATTTTGCTAATAAATTTATCCTCTAATGCATTGAGTGGAAAAATTCCACTTGAAATTTCAAACTTAAGGGCTCTTGTGTTGATGGACTTATCAAGAAATCAAATTTCAAGGAACATTCCTACAACTATTGGTGACTTGCAAACTTTGCAAACCCTATCTTTAGCACATAACCAATTGCAAGGGGGTATTCCTAAATCATTTGACAAGATGATTAGCTTAGATTTCTTGGACCTTTCTCATAATAACCTTTCTGGAGTGATTCCAAAATCCTTGGAGTTGCTTCTCCATCTTAATTACCTTAATTTTTCATACAATTTCTTGCATGGAGAGATTCCAGATGGTGGCCCTTTCAAAAATTTTACAGCTGAATCTTTTATGATGAATAGAGGTCTTTGTGGGAATCCTAAACTCCAAGTCCAACCATGTAGAAAAGGAAAAAAGCATGGATCAACTAAAGAGATGCTTTTGCTCAAGTGCTTGTTGCCTATCATTGTGGCAACCATTTTGGTTATTTCATGCATATTCTTTCTGAAACCCAAGAGAGATTATGTCAGTGATTCAACTAACCGGGATATATTAGATTTAGAGGCACCAATTAGGATACCCTACTATGAACTTCTTCAAGGAACAAATGGATTTGATGAGAATAACCTTCTTGGAAGAGGCGGTTTTGGATCAGTATACAAAGGTATTCTTTCAAATGGAAAGAAAATTGCAGTTAAAGTATTTAATCTAGACTTGGAAGAAGCGTTAAGAAGCTTTGATACTGAATGTGCTGCAATGTGCAACTTGCGTCATCGCAATCTCATTAAGATTATAAGTAGTTGTTCAAATGTTGATTTTAAATCTCTAATAATGGAATTTATGCCAAATGGGAGTCTTGATAAATGGTTATACTCTCATAACTATTGCTTAGATATCTTGCAAAGGTTGAACATAATGATTGATGTAGCATCTGCATTGGAGTATCTTCATTATGGTTCTTCTATACCGATGGTTCATTGTGATGTAAAACCAAGCAATATTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGACTTTGGCATTGTTAAGCTGTTAGGCGAAGGTCAACTAGAAATTTATACGAAGACTTTAGCTACAATGGGCTATATTGCACCAGAATATGGATCGAAAGGAATTGTTTCGATTAAAGGAGATGTGTATAGTTATGGTATTATGTTGATCGAAATATTTACAAGGAAGAAGCCAACAGATGACATGTTTGTTCAAGGTCTATGTTTGAAAGACTGGGTTAGAAAATCATTACCACATGCAATAACTCATATTTTGGATCCCAATTTGTTTCAAAGAGACAATCAAAGCATTGATCATATATCATCAATTTTTGAGTTAGCCTTGAGTTGTTGCACTGATTTACCTGATACACGAATTAATATGACAAGTGTTATGGTGTCATTGAAAAAAATCAAGGCCATGTTTATACAAAGTGGTATATAA 2364 0.3486 MTCKGLVDIIYTDNLEGEIPSFLFNMSSLRNVVFGSNYLHGNLPQDMCNKLPLLEIFSITENQFEGSIPKSISNCTSLKMLYLGVNSFTGFVPKEIGIFGKLERLDLGYNYLSGLVPSNIFNISTLTMLSLANNSFHGLLPSNIGSGLPNLIFLVLAENEFTGRLPKSIFNVSKLLFLDLWNNKFNGAIPNALENLTNLLRLDLHENDLNGIVPTTMNKLQSLQYLDLSYNKLQGNIIEEICQIKNLEELYLSNNMFFGWVPACVGNLTSLRKLNLGSNKLISHIPSSLWSLRDILLINLSSNALSGKIPLEISNLRALVLMDLSRNQISRNIPTTIGDLQTLQTLSLAHNQLQGGIPKSFDKMISLDFLDLSHNNLSGVIPKSLELLLHLNYLNFSYNFLHGEIPDGGPFKNFTAESFMMNRGLCGNPKLQVQPCRKGKKHGSTKEMLLLKCLLPIIVATILVISCIFFLKPKRDYVSDSTNRDILDLEAPIRIPYYELLQGTNGFDENNLLGRGGFGSVYKGILSNGKKIAVKVFNLDLEEALRSFDTECAAMCNLRHRNLIKIISSCSNVDFKSLIMEFMPNGSLDKWLYSHNYCLDILQRLNIMIDVASALEYLHYGSSIPMVHCDVKPSNILLDEDMVAHLSDFGIVKLLGEGQLEIYTKTLATMGYIAPEYGSKGIVSIKGDVYSYGIMLIEIFTRKKPTDDMFVQGLCLKDWVRKSLPHAITHILDPNLFQRDNQSIDHISSIFELALSCCTDLPDTRINMTSVMVSLKKIKAMFIQSGI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g2040 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Bisa04g2040 787 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Bisa04g2040 787 FunFam Leucine-rich repeat receptor protein kinase EMS1 48 143 - -
Bisa04g2040 787 PRINTS Leucine-rich repeat signature 220 233 - -
Bisa04g2040 787 PRINTS Leucine-rich repeat signature 102 115 - -
Bisa04g2040 787 Coils Coil 230 250 - -
Bisa04g2040 787 Pfam Leucine Rich Repeat 270 292 IPR001611 GO:0005515
Bisa04g2040 787 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515
Bisa04g2040 787 Gene3D Transferase(Phosphotransferase) domain 1 583 784 - -
Bisa04g2040 787 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 146 440 - -
Bisa04g2040 787 Pfam Leucine rich repeat 178 233 IPR001611 GO:0005515
Bisa04g2040 787 Pfam Leucine rich repeat 319 377 IPR001611 GO:0005515
Bisa04g2040 787 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Bisa04g2040 787 SMART serkin_6 507 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2040 787 SUPERFAMILY L domain-like 174 429 - -
Bisa04g2040 787 SMART LRR_typ_2 220 244 IPR003591 -
Bisa04g2040 787 SMART LRR_typ_2 196 219 IPR003591 -
Bisa04g2040 787 SMART LRR_typ_2 316 340 IPR003591 -
Bisa04g2040 787 SMART LRR_typ_2 268 292 IPR003591 -
Bisa04g2040 787 SMART LRR_typ_2 364 387 IPR003591 -
Bisa04g2040 787 SMART LRR_typ_2 148 172 IPR003591 -
Bisa04g2040 787 SMART LRR_typ_2 99 123 IPR003591 -
Bisa04g2040 787 ProSiteProfiles Protein kinase domain profile. 507 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2040 787 Gene3D Ribonuclease Inhibitor 145 444 IPR032675 -
Bisa04g2040 787 PANTHER OS04G0122200 PROTEIN 101 208 - -
Bisa04g2040 787 SUPERFAMILY Protein kinase-like (PK-like) 490 775 IPR011009 -
Bisa04g2040 787 Gene3D Ribonuclease Inhibitor 9 144 IPR032675 -
Bisa04g2040 787 ProSiteProfiles Leucine-rich repeat profile. 366 388 IPR001611 GO:0005515
Bisa04g2040 787 FunFam Serine-threonine protein kinase plant-type 488 582 - -
Bisa04g2040 787 SUPERFAMILY RNI-like 14 258 - -
Bisa04g2040 787 Pfam Protein kinase domain 508 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g2040 787 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 583 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g2040 Bisa-ChrBisa04 64382233 64390558 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g2040 10 785 Receptor kinase-like Gene Family AT3G47570 35.824 3.92e-156 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa04g2040 Pkinase 2.6e-43 CL0016