Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1992 ATGGATCCACTCAATGGAGGTAACAATCCAACCAACAACCAAAATCTCAGCTCAAAGCAACGATTACGCTGGACACATGAGCTTCATGAACGTTTTGTTGATGCTGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGTTTAACAATATATCATGTTAAAAGCCATTTACAGAAATATCGACTTGCAAAATACCTTCCTGACTCCTCATCTGATGGGAAAAAAGCCGAAAAGAAAGAAACAGGGGACATGCTGTCAAATCTAGATAGCTCATCTGGTGGGATGCAAATTACTGAAGCACTAAAGCTGCAAATGGAGGTGCAGAAGCGACTACATGAGCAATTAGAGGTGCAGAGACAGCTACAATTGCGAATAGAAGCCCAGGGCAAATACTTGAAGAAGATAATCGAAGAGCAACAGCGACTCAGCGGGGTTCTTTCGGAAGCACCCGGCTCTGGCACTGATGCTCTACCATCAGCTGATGCGTGCCAAGAACCTGAGAACAAGACTGACCCAGCAACCCCTGCCCCAACCTCCGAGTGCCCCCTTCTGGACAAAACTGCCAAAGAACACACCTCAGCGAAGAGTCTATCTATTGATGAATCTTTCTCGTCTCTCCATGAGCCATTGACACCGGATTCTGGTTGCAACCCGGGTTCCCCCACCAACGACAGCCCTAGAGGAGAGAGATCAACAAAGAAGCAACGGGTGAGCATGGAGGGAGCATACTCTAAACCCGAAATGATGCTTCCACATCAGATTCTGGAGTCAAGCATGTCATCATACCAGCAATCCGACACTGTGTTCCTTACCAGAGAGCAGTTTGATCCTTCATTGGGTATGCCTACAAGAAGTGAGGAGGCATTGGAAAAGGTTGGTGGTAGCAATCTGTGA 927 0.4757 MDPLNGGNNPTNNQNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKAEKKETGDMLSNLDSSSGGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGTDALPSADACQEPENKTDPATPAPTSECPLLDKTAKEHTSAKSLSIDESFSSLHEPLTPDSGCNPGSPTNDSPRGERSTKKQRVSMEGAYSKPEMMLPHQILESSMSSYQQSDTVFLTREQFDPSLGMPTRSEEALEKVGGSNL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1992 308 Coils Coil 109 129 - -
Bisa04g1992 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Bisa04g1992 308 MobiDBLite consensus disorder prediction 78 102 - -
Bisa04g1992 308 Gene3D - 18 77 - -
Bisa04g1992 308 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Bisa04g1992 308 MobiDBLite consensus disorder prediction 157 193 - -
Bisa04g1992 308 MobiDBLite consensus disorder prediction 216 259 - -
Bisa04g1992 308 MobiDBLite consensus disorder prediction 286 308 - -
Bisa04g1992 308 FunFam Myb family transcription factor 18 76 - -
Bisa04g1992 308 MobiDBLite consensus disorder prediction 79 95 - -
Bisa04g1992 308 MobiDBLite consensus disorder prediction 216 237 - -
Bisa04g1992 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 74 IPR006447 GO:0003677
Bisa04g1992 308 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Bisa04g1992 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 298 IPR044848 GO:0003700
Bisa04g1992 308 Pfam MYB-CC type transfactor, LHEQLE motif 106 152 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1992 Bisa-ChrBisa04 62771915 62774917 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1992 54 308 G2-like Transcription Factor Family AT2G01060 65.759 9.84e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa04g1992 Myb_DNA-binding 2e-08 CL0123