Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1983 ATGCATGTTGCAGTACCAGTAACAGATCAGAAGGATTTCACGGCCCTAATGTCTCTCAAGGGCAGCTGGCAGAACACACCTCAAAGTTGGTCCGGTTCGGATCCGTGTGGTGAATCTGGTGATGGTTGGAATGGAATCAAGTGCGTCAACTCTCGTGTTAACTCCATAGTATTATCAAGCATGGATTTGATTGGCCAGATACCTGGAGATATCGGTTTACTATCTGAATTAGATACATTGGATCTCTCTTACAATAAGGGGCTAACAGGTTCGCTTCCACAAGAAATCGGAAATTTGGCGAAGCTGTCTAGCCTGTTTCTCGTTGGTTGTGGTTTCACTGGTCCTATTCCAGATAATATAGGGTCTCTCCGGCAACTTATCTTCTTATCTTTAAATTTTAACAACTTTTCTGGAACGATTCCGGCTTCAATTGGTAATCTATTAAATCTCCACTGGCTAGATTTAACTGAAAACCAGCTTGGAGGATCCATCCCTATATCAAGTGATAGTGCACCTGGTCTTGATCAGCTACTCAATGCAAAACACTTTCATCTTGGGAAGAACAAGCTATCAGGCACAATTCCTCCTAAACTTTTTAGCTCAAAAATGAAGCTCATACATGTCCTTTTTGATAGTAATCAACTTTCCGGCAGCATTCCATCTTCACTTGGACTTGTTCAGAGTCTACAGCTGGTGCGCTTTGACAGAAACAATCTAACTGGACATTTGCCTGAAAACATCAATAATCTTACCAGTGTTACAGAGCTGTACTTGTCTAACAATGAGCTGTCCGGCTCTCTTCCAAACCTAAGTGCAATGATAAACTTAACATACCTTGATATGAGCAACAACAGTGGGTTTGATCGATCAGATTTCCCACCATCGCTTTCAACTTTAGGGAATTTGGCAACATTGGTGCTAAAATCTAATAAGCTAAATGGCACTTTGGATATTGGCAATAAATATAGCAATCAACTGCAACAAATTGAATTGCAGCATAATGAAATTGACAAACTTTTGCCAAGTCATGGCGTCCCCAACGTAAAGATAATACTTGAAGACAATCCGATTTGTCATGAATTGGTATCACCAAAACCAAGTTACTGCTATGATAAGCTACGAAATGTATCATATACAGCCCCAACAAGTATTTGTCTTCCTTTTCCCTGTGGTTCAGATCAGAAGATTTTCAGCCCCAATTGTAAATGTGCATATCCATATATAGGAACTTTAACTTTTAGAACAGCTTCCCCCGGGACTTGGGATCAAGATGCACACCTTGAGAAATCTCTAATGGACGAATTTAAACGTCATTATCTACCTGTAGATTCAGTCTATCTAGAAAATCTAACCCGAAGTCAATTTCAAGATCCTCAATTGAGCATACTGGTCTTTCCATTAGGCCAAGACCATTTCAATCGAACAGGGATTTCCAGTATAAGCTCTTTTCTAATCATTCAGCCCTTCTATTTCATTGCCGATCCCTATGAATACGATGAAGAACCAAGGGGATCAAGTAAACCCTCAAATACTGCCCTTATAATTGGAGCAGCAGTTGGTGGTTTTGTCATGATATTTTTGCTACTCCTTGCTGGTATTTATGTTTTCCACCAAAGGAAAAGGGCAGAAAAAGCAATTGCTCAAAGCAACCCTTTTGAACATGTAAGACATCGGCGTTCTAGTGACAGCAAAAGCATAAATCCTCAGTGGAAAGTAACAAGGCCATTCTCGTTCGCGGAGGTTCAGAAATATACAAACAATTTTTCAAAAGCCAATGATATAGGATCTGGGGGTTATGGAAAGGTTTATCGGGGGACTCTTCCCAATGGGCAACTGGTAGCCATAAAACGATCTCAAAGAGAATCTAAGCAAGGGGAGAATGAGTTTACAGCTGAGATTGAGCTCCTATCAAGGGTCCACCATAAGAATCTTGTAAGGCTTATAGGATTCTGTTTTGACCGAGGAGAACAAATGCTGGTTTATGAGTATGTCCCTAATGGAACTTTACGAGACACTATCACAGGGAAATCAGGAATCAGGTTGGATTGGACTAGAAGGCTGAAGGTAGCCCTTGGTGCTGCCAGGGGTTTGACTTATCTTCATGAACATGTCAATCCACCTATCATACATAGAGACATCAAATCAACCAACATTTTGCTAGATGAACGGTTGAATGCCAAAGTTGCTGATTTTGGTCTTTCCAAGCTTATGGTGGATGATGAGAAAGATCATGTTACAACTCAAGTAAAAGGGACAATGGGGTACCTAGATCCAGATTATTATACAAGTCAGCAATTGACTGAAAAGAGTGACATTTATAGCTTTGGAGTGCTGATGTTGGAGCTGATAACCGCGAGAAAACCGATCGAGAAAGGGTCATATATTGTGAAAGTGGTTAGGAATTCAATTGATAAGACAAAAGAGTTGTACGGTCTTCATGAAACTCTTGACCCAGTCCTCATTTCGGGGTCAACACTGAAGGGGTTTGAGAAATTCTTGGATCTCTCAATGAAGTGCCTTGAAGAGTCACGCATTGAAAGGCCTAAAATGAGTTATGTGGTAAAAGAACTTGAAAGCTTGCTGGAGTTTAATTCTGTGAACGCCACTGCTGAATCAGCAGAAGCTTCCACTTCGTCTGTTTATGATGTGATAATAGATAAAGGGAGTCCCCAGCATCTTTATAGTAATGAGTCCCTTGATTCAACTGTGGCTCCTCTACAACCAAAAAATGACCCTACGTTACTTGTTTAA 2751 0.406 MHVAVPVTDQKDFTALMSLKGSWQNTPQSWSGSDPCGESGDGWNGIKCVNSRVNSIVLSSMDLIGQIPGDIGLLSELDTLDLSYNKGLTGSLPQEIGNLAKLSSLFLVGCGFTGPIPDNIGSLRQLIFLSLNFNNFSGTIPASIGNLLNLHWLDLTENQLGGSIPISSDSAPGLDQLLNAKHFHLGKNKLSGTIPPKLFSSKMKLIHVLFDSNQLSGSIPSSLGLVQSLQLVRFDRNNLTGHLPENINNLTSVTELYLSNNELSGSLPNLSAMINLTYLDMSNNSGFDRSDFPPSLSTLGNLATLVLKSNKLNGTLDIGNKYSNQLQQIELQHNEIDKLLPSHGVPNVKIILEDNPICHELVSPKPSYCYDKLRNVSYTAPTSICLPFPCGSDQKIFSPNCKCAYPYIGTLTFRTASPGTWDQDAHLEKSLMDEFKRHYLPVDSVYLENLTRSQFQDPQLSILVFPLGQDHFNRTGISSISSFLIIQPFYFIADPYEYDEEPRGSSKPSNTALIIGAAVGGFVMIFLLLLAGIYVFHQRKRAEKAIAQSNPFEHVRHRRSSDSKSINPQWKVTRPFSFAEVQKYTNNFSKANDIGSGGYGKVYRGTLPNGQLVAIKRSQRESKQGENEFTAEIELLSRVHHKNLVRLIGFCFDRGEQMLVYEYVPNGTLRDTITGKSGIRLDWTRRLKVALGAARGLTYLHEHVNPPIIHRDIKSTNILLDERLNAKVADFGLSKLMVDDEKDHVTTQVKGTMGYLDPDYYTSQQLTEKSDIYSFGVLMLELITARKPIEKGSYIVKVVRNSIDKTKELYGLHETLDPVLISGSTLKGFEKFLDLSMKCLEESRIERPKMSYVVKELESLLEFNSVNATAESAEASTSSVYDVIIDKGSPQHLYSNESLDSTVAPLQPKNDPTLLV 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1983 916 Gene3D Transferase(Phosphotransferase) domain 1 664 884 - -
Bisa04g1983 916 Pfam Leucine Rich repeats (2 copies) 251 284 IPR025875 -
Bisa04g1983 916 CDD STKc_IRAK 594 860 - -
Bisa04g1983 916 PANTHER RECEPTOR-LIKE PROTEIN 55 20 859 - -
Bisa04g1983 916 Gene3D Phosphorylase Kinase; domain 1 559 663 - -
Bisa04g1983 916 ProSiteProfiles Protein kinase domain profile. 588 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1983 916 SUPERFAMILY L domain-like 43 350 - -
Bisa04g1983 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Bisa04g1983 916 Gene3D Ribonuclease Inhibitor 269 365 IPR032675 -
Bisa04g1983 916 Gene3D Ribonuclease Inhibitor 9 168 IPR032675 -
Bisa04g1983 916 Gene3D Ribonuclease Inhibitor 169 268 IPR032675 -
Bisa04g1983 916 SUPERFAMILY Protein kinase-like (PK-like) 561 857 IPR011009 -
Bisa04g1983 916 Pfam Protein kinase domain 589 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1983 916 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Bisa04g1983 916 SMART serkin_6 588 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1983 916 FunFam Leucine-rich repeat protein kinase family protein 553 663 - -
Bisa04g1983 916 FunFam Leucine-rich repeat protein kinase family protein 170 269 - -
Bisa04g1983 916 FunFam Leucine-rich repeat family protein 11 169 - -
Bisa04g1983 916 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 664 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1983 Bisa-ChrBisa04 62632701 62643421 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1983 7 899 Receptor kinase-like Gene Family AT5G49760 51.554 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa04g1983 Pkinase 2.9e-47 CL0016