Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1980 ATGGACGAATTTAAACGTCATTATCTACCTGTAGATTCAGTCTATCTAGAAAATCTAACCCGAAGTCAATTTCAAGATCCTCAATTGAGCATACTGGTCTTTCCATTAGGCCAAGACCATTTCAATCGAACAGGGATTTCCAGTATAAGCTCTTTTCTAATCGTTCAGCCCTTCTATTTCATTGCCGATCCCTATGAACACGATGAAGAACCAAGGGGATCAAGTAAACCCTCAAATACTGCCCTTATAATTGGAGCAGCAGTTGGTGGTTTTGTCATGATATTTTTGCTACTCCTTGCTGGTATTTATGTTTTCCACCAAAGGAAAAGGGCAGAAAAAGCAATTGCTCAAAGCAACCCTTTTGAACATGAAAGACGTCGGCATTCTAGTGAGAGCAAAAGCATAAATCCTCAGTGGAAAGTAACAAGGCCATTCTCGTTCGCAGAGGTTCAGAAATATACAAACAATTTTTCACAAGCTAATGATATAGGATCTGGGGGTTATGGAAAGGTTTATCGAGGGACTCTTCCCAATGGGCAACTGGTAGCCATAAAACGATCTCAAAGAGAATCTAAGCAAGGGGAGAATGAGTTTACAGCTGAGATTGAGCTCCTATCAAGGGTCCACCATAAGAATCTTGTAAGGCTTGTAGGATTCTGTTTTGACCGAGGAGAACAAATGCTGGTTTATGAGTATGTCCCTAATGGAACTTTACGAGACAATATCACAGGGAAATCAGGAATCAGGTTGGATTGGACTAGAAGGTTGAAGGTAGCCCTTGGTGCTGCTAGGGGTTTGACTTATCTTCATGAACATGTCAATCCACCTATCATACATAGAGACATCAAATCAACCAACATTTTGCTAGATGAACGGTTGAATGCCAAAGTTGCTGATTTTGGTCTTTCCAAGCTTATGGTGGATGATGAGAAAGATCATGTTACAACTCAAGTGAAAGGGACAATGGGGTACCTAGATCCAGATTATTATACTAGTCAGCAACTGACTGAAAAGAGTGACATTTATAGCTTTGGAGTGCTAATGCTGGAGCTGATAACTGCGAGAAAACCGATCGAGAAAGGGTCATATATTGTGAAAGTGGTTAGGAATTCAATTGATAAGACAAAAGAGTTGTATGGTCTTTATGAAACTCTTGACCCAGTCCTCATTTCGGGGTCAACATTGAAGGGGTTTGAGAAATTCTTGGATCTCTCAATGAAGTGCCTTGAAGAGTCACGCGCTGAAAGGCCTAAAATGAGTGATGTGGTAAAAGAACTTGAAAGCTTGTTGGAGTTTAATTCTGTGAACGCCACTGCTGAATCAGCAGAAGCTTCCACTTCGTCTATTTATGATGTGATCATAGATAAAGGGAGTCCCCATGATCTTTACACTAATGAGTCCCTTGATTCACCTGTGGCTCCTCTACAACCAAAAAATGACCCTAAGTTACTTGTTTAA 1458 0.406 MDEFKRHYLPVDSVYLENLTRSQFQDPQLSILVFPLGQDHFNRTGISSISSFLIVQPFYFIADPYEHDEEPRGSSKPSNTALIIGAAVGGFVMIFLLLLAGIYVFHQRKRAEKAIAQSNPFEHERRRHSSESKSINPQWKVTRPFSFAEVQKYTNNFSQANDIGSGGYGKVYRGTLPNGQLVAIKRSQRESKQGENEFTAEIELLSRVHHKNLVRLVGFCFDRGEQMLVYEYVPNGTLRDNITGKSGIRLDWTRRLKVALGAARGLTYLHEHVNPPIIHRDIKSTNILLDERLNAKVADFGLSKLMVDDEKDHVTTQVKGTMGYLDPDYYTSQQLTEKSDIYSFGVLMLELITARKPIEKGSYIVKVVRNSIDKTKELYGLYETLDPVLISGSTLKGFEKFLDLSMKCLEESRAERPKMSDVVKELESLLEFNSVNATAESAEASTSSIYDVIIDKGSPHDLYTNESLDSPVAPLQPKNDPKLLV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1980 485 FunFam Leucine-rich repeat protein kinase family protein 121 232 - -
Bisa04g1980 485 Pfam Protein tyrosine and serine/threonine kinase 160 426 IPR001245 GO:0004672|GO:0006468
Bisa04g1980 485 MobiDBLite consensus disorder prediction 116 133 - -
Bisa04g1980 485 Gene3D Phosphorylase Kinase; domain 1 117 232 - -
Bisa04g1980 485 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Bisa04g1980 485 ProSiteProfiles Protein kinase domain profile. 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1980 485 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 54 433 - -
Bisa04g1980 485 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 233 443 - -
Bisa04g1980 485 Gene3D Transferase(Phosphotransferase) domain 1 233 453 - -
Bisa04g1980 485 SUPERFAMILY Protein kinase-like (PK-like) 131 426 IPR011009 -
Bisa04g1980 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Bisa04g1980 485 MobiDBLite consensus disorder prediction 116 135 - -
Bisa04g1980 485 CDD STKc_IRAK 163 429 - -
Bisa04g1980 485 SMART serkin_6 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1980 Bisa-ChrBisa04 62582229 62587260 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1980 2 478 Receptor kinase-like Gene Family AT5G49760 54.361 8.40e-161 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa04g1980 Pkinase 3.5e-48 CL0016