Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1977 ATGATGAGTGGAAGAATACTAGTATTCCTCCTCCTTTTTCTTTCCAACTATTTGTTGGACTCAGTGGCACAAACTGCTAACGACGATATGATTGCCCTGAAGTCGCTAATGGATTCCTTGCAGAACACACCTCCCTCTTGGCTGGGATCAGATCCTTGTAGTGGCTGGGAAGGAATTAAGTGCACTGATTCACGTGTTACTTCCATAACATTATCAAGCACAGGTTTGACAGGCCAACTTTCTGGAGATGTTGGATCACTATCTGAATTAGAGACCTTGGATTTGTCATACAACAAGGGCTTAACAGGATCACTTCCACAAAGTATAGGAAAATTGAAGAATCTATCAACCTTAATTCTTGTTGGTTGTAATTTTAATGGCCCTATTCCAGATGAAATAGGACATCTGCAGGAGCTCCGCTACTTATCTTTAAATTCCAATAAATTTATTGGACAAATTCCAGCTTCTATTGGCAATCTATCTAAACTTTATTGGTTAGATTTAGCTGACAATCAGCTTGATGGATCCATCCCAGTATCTATTGGCAGTACTCCTGGTCTTGATATGCTACACAAAACAAAGCACTTTCATTTTGGGAAGAATAAGCTCTCAGGTCGTATTCCTCCTGAACTTTTTAGTTCAGAGATGAATCTGATTCATGTGCTTTTCGAAAGCAATAACCTTAACGGCACCATTCCATCTACACTTGGACTTGTTGAGAGCCTGGAGGTGTTGCGTCTTGATGGTAATTCTTTAAGTGGATCTGTGCCTCAGAACATCACCAACCTTATCAAAGTTCAAGAAATGTACTTGTCCAACAATAAGCTCTCAGGTTCCCTGCCAAGCCTTGCTGGGATGAGTGTCCTCAACTACCTGGATATGAGCAACAATAGCTTTAGTCCATGGGATTTTCCACCATGGTTTTCAAACCTAGAGTCTCTAACAACGTTAAAGATGGAGGACACGAGCCTTCAAGGACAGATCGATGATTCTTTCTTCAGCCTTGCCAATTTACAGACTGTGTCTCTAAGAAACAATAAACTAAATGGAACCTTGGATATCAGCACCGTCCAGAGCCAACTGCGAATTGACTTGCAGGCTAATTTCATTTCCAACCTTAAGCCAAATGATGGAGTCCCCAATGTCAAGATAGTACTTAAAGGGAACCCAGTTTGTGAAGAAACAGGAACACAAGATTACTGCTCCCAACCCAATGATAATACCATCTCATATGTAACACCGTCAAGAAACTGTCAACCTAGTAGTATCTGCAGTTCAGAAAAAATTCCTAGTCCTAATTGCAAATGCTCCTATCCGTATACAGGAAATTTGACTTTCAGAGCACCTTCCTTCTCAGACTTGGGAAACAACACTCACTATCAAACCCTTGAGGAATATCTTATGCAGTCTTTTGAATCTCACGATCTACCTGTGGATTCAGTTTCCCTGAGCCATCCAACCAAGGATTCAAATCAGTATCTTACATTGAGCTTACAAGTCTTCCCATTAAACCAAGATCGTTTCAACCGAACAGGGACTCTTAGCATTGGCTTTCTGCTAAGTAACCAGACTTTTAAGCCTCCTAAAAGTTTTGGACCATTTTACTTCCTTGCAGACGCATATGAGCATTTTGGAATTGAGAGGTCAAGTAAATCATCAAACATTGGCATCATAATTGGAGCTGCAGTGGGTGGTTCAGTCCTGTTAGTGTTATTACTATTTGCAGGAGTTTATGCTTTCATCCAAAAGAGAAGAGCAGAAAAAGCAATTGGACACAGCAATCCTTTTAGACGATGGGATACAAGTGATAGCAATAATGGTGTCCCTCAGTTGAAGGGAGCAAGGCAATTCTCTTTTGAAGAGATCAAAAAATGTACCGCAAATTTTGCTCAAGAGAATGCTATTGGATCTGGAGGTTATGGGAAGGTTTACAAGGGAACTCTTCCAAATGGCCAACTAATAGCCGTAAAACGAGCTCAAAAAGAATCAATGCAGGGATCATATGAATTTAAAGCTGAGATTGAACTCCTATCAAGAGTCCACCATAAAAATCTTGTTAGCCTTATAGGGTTCTGCTTTGAAAGAGGAGATCAAATGCTGGTCTATGAGTATGTTCCAAATGGAACTCTAAAGGAAGCTCTTTCAGGGAGAATCAGGTTGGATTGGAATAGAAGGCTAAAAGTTGCCCTTGGTGCTGCTAGAGGTTTGGCTTATCTTCATGAACATGCCAACCCTCCTATCATACACAGGGACATCAAATCAAACAATATTTTGTTGGATCAGCGCTTGAATGCAAAGGTTGCTGATTTCGGGCTCTCCAAGACTATGGTTGATAGCGAAAAAGATCATATTACCACTCAAGTTAAAGGAACAATGGGTTATTTGGACCCAGAGTATTATATGTCTCAACAGTTGACTGAGAAGAGCGATATTTATAGCTTTGGAGTGCTATTGTTGGAGCTGATAACCGCAAGAAAGCCCATAGAACGAGGGAAATACATTGTGAAAGAGGTTAAGAATGCAATTGATAAGTCAAAATCTTTATATGGCCTTTATGAACTCATCGATCCAACCATTGGTTTAGACTCGACAACAGTGAGTGGCTTTGATAAGTTTGTAGATCTTGCAATGAAGTGTGTTGAGGATTCAGGTGCTAACAGGCCTGCAATGACTGATGTAGTAAAAGAAATTGAAAACTTGTTGTTGTTAGTTGGTTCTAACCCAATGACTGATTCAGCATCCACGTCAGCTAGTTATGAGGAAGTCAGTAAGGGGAGTTCCCACCACCCTTACAGCAATGAGTTTTCTGATTCAGGCGTGGTGCTTCCAAATCCAAAACTTGCCATGTAG 2850 0.4063 MMSGRILVFLLLFLSNYLLDSVAQTANDDMIALKSLMDSLQNTPPSWLGSDPCSGWEGIKCTDSRVTSITLSSTGLTGQLSGDVGSLSELETLDLSYNKGLTGSLPQSIGKLKNLSTLILVGCNFNGPIPDEIGHLQELRYLSLNSNKFIGQIPASIGNLSKLYWLDLADNQLDGSIPVSIGSTPGLDMLHKTKHFHFGKNKLSGRIPPELFSSEMNLIHVLFESNNLNGTIPSTLGLVESLEVLRLDGNSLSGSVPQNITNLIKVQEMYLSNNKLSGSLPSLAGMSVLNYLDMSNNSFSPWDFPPWFSNLESLTTLKMEDTSLQGQIDDSFFSLANLQTVSLRNNKLNGTLDISTVQSQLRIDLQANFISNLKPNDGVPNVKIVLKGNPVCEETGTQDYCSQPNDNTISYVTPSRNCQPSSICSSEKIPSPNCKCSYPYTGNLTFRAPSFSDLGNNTHYQTLEEYLMQSFESHDLPVDSVSLSHPTKDSNQYLTLSLQVFPLNQDRFNRTGTLSIGFLLSNQTFKPPKSFGPFYFLADAYEHFGIERSSKSSNIGIIIGAAVGGSVLLVLLLFAGVYAFIQKRRAEKAIGHSNPFRRWDTSDSNNGVPQLKGARQFSFEEIKKCTANFAQENAIGSGGYGKVYKGTLPNGQLIAVKRAQKESMQGSYEFKAEIELLSRVHHKNLVSLIGFCFERGDQMLVYEYVPNGTLKEALSGRIRLDWNRRLKVALGAARGLAYLHEHANPPIIHRDIKSNNILLDQRLNAKVADFGLSKTMVDSEKDHITTQVKGTMGYLDPEYYMSQQLTEKSDIYSFGVLLLELITARKPIERGKYIVKEVKNAIDKSKSLYGLYELIDPTIGLDSTTVSGFDKFVDLAMKCVEDSGANRPAMTDVVKEIENLLLLVGSNPMTDSASTSASYEEVSKGSSHHPYSNEFSDSGVVLPNPKLAM 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1977 949 MobiDBLite consensus disorder prediction 910 937 - -
Bisa04g1977 949 ProSiteProfiles Protein kinase domain profile. 629 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1977 949 Coils Coil 23 43 - -
Bisa04g1977 949 Gene3D Transferase(Phosphotransferase) domain 1 705 909 - -
Bisa04g1977 949 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
Bisa04g1977 949 Pfam Protein kinase domain 630 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1977 949 FunFam Leucine-rich repeat protein kinase family protein 595 704 - -
Bisa04g1977 949 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Bisa04g1977 949 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 705 913 - -
Bisa04g1977 949 Gene3D Ribonuclease Inhibitor 183 284 IPR032675 -
Bisa04g1977 949 PANTHER RECEPTOR-LIKE PROTEIN 55 35 899 - -
Bisa04g1977 949 CDD STKc_IRAK 635 900 - -
Bisa04g1977 949 SUPERFAMILY L domain-like 52 376 - -
Bisa04g1977 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Bisa04g1977 949 SUPERFAMILY Protein kinase-like (PK-like) 615 923 IPR011009 -
Bisa04g1977 949 SMART serkin_6 629 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1977 949 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Bisa04g1977 949 Gene3D Ribonuclease Inhibitor 285 426 IPR032675 -
Bisa04g1977 949 FunFam Leucine-rich repeat family protein 28 182 - -
Bisa04g1977 949 Gene3D Phosphorylase Kinase; domain 1 600 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1977 Bisa-ChrBisa04 62469060 62489997 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1977 2 939 Receptor kinase-like Gene Family AT5G49760 56.467 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa04g1977 Pkinase 1.4e-48 CL0016