Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1976 ATGAGCCTCGCCCACAGCCACAGCCATGACGACACCGCCGCCACGCCATCGGCCGGGAAACTCAAAGACGACGACGACAACCACGACCACGACATGGTGATGCCGGGATTCCGGTTCCACCCGACGGAGGAAGAACTCGTGGAGTTCTACCTCCGCCGTAAGGTGGAGGGCAAGAGGTTCAATGTTGAGCTCATCACTTTCCTTGATCTTTATCGCTATGACCCTTGGGAGCTTCCAGCCATGGCAGCAATTGGAGAGAAGGAGTGGTACTTCTATGTGCCCAGAGATCGGAAGTACCGAAACGGCGACAGGCCGAACCGGGTGACGACTTCGGGGTACTGGAAGGCGACCGGAGCCGATAGAATGATCAGAAGTGAGAATTTCAGGTCCATTGGGCTCAAGAAAACCCTAGTTTTCTACTCTGGCAAAGCTCCCAAAGGTATCAGAACCAGTTGGATTATGAACGAGTATCGCTTGCCCCACCATGACACTGAACGATATCAAAAGACTGAGATATCGCTTTGTCGAGTGTACAAGAGAGCAGGAGTAGAAGATCACCCCTCTCTCCCTCGTTCTCTCCTCACAAGGCCATCATCTTCATCCTCTAGAGCTTCTTCACTCTCAGTAATATCAGATCATCACAAGACCAATAAGCACAGCCTCAACGACACGACGTCGTTTCATCATCACAACATAGAATTTGTGGGACAAAACTGTAGTACTACTACTCCATTATTGGGTCACAACGACAAGGTGAACAACATCAACACTAATCTAACTGATCATCATCATCAAGAAGGATCCATCATAAGAACCCCATCATCATCAGATCATCATCATCATCATCATCATGTGACTACATCTCTTGGGCTTTCAAAGCAAATGATCAGCACCACCACCATCACCAACATCCCTTACCCTTCACCTACATTGCTAGTTCCAATAATGCAAGAACGAGAAGAAGCAGCTGAAGCTAATTTGCTAATGAAGCAAACAGTGCCAGCTCAAGCGGTCACGTCATCGCCCATCGTGGACGATCTCAATAGGCTAGTGAATTACAATAATCAGCTGCAACAGTTCTACAGCACTAACAATGCTCCAATCAATCACCACCCGTTGATCTCTAATTTGCTAGTGCAACCACAACAACAACCAACGGCCGTGATCAATTCTTCATTGTTATTGTCCGTACCGAATGATACATTTCCATTAACAGCAACGACGACAACAACCGCCGCCATAACCTCCTTCTCCGACAGACTCTGGGAGTGGAATCTTATTTCTGAGGCAAATAACAGAGAGTACAGCAACATGTCCTTCAAGTAA 1326 0.4766 MSLAHSHSHDDTAATPSAGKLKDDDDNHDHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHDTERYQKTEISLCRVYKRAGVEDHPSLPRSLLTRPSSSSSRASSLSVISDHHKTNKHSLNDTTSFHHHNIEFVGQNCSTTTPLLGHNDKVNNINTNLTDHHHQEGSIIRTPSSSDHHHHHHHVTTSLGLSKQMISTTTITNIPYPSPTLLVPIMQEREEAAEANLLMKQTVPAQAVTSSPIVDDLNRLVNYNNQLQQFYSTNNAPINHHPLISNLLVQPQQQPTAVINSSLLLSVPNDTFPLTATTTTTAAITSFSDRLWEWNLISEANNREYSNMSFK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1976 441 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 31 261 - -
Bisa04g1976 441 MobiDBLite consensus disorder prediction 187 220 - -
Bisa04g1976 441 SUPERFAMILY NAC domain 33 179 IPR036093 GO:0003677|GO:0006355
Bisa04g1976 441 MobiDBLite consensus disorder prediction 192 211 - -
Bisa04g1976 441 MobiDBLite consensus disorder prediction 1 27 - -
Bisa04g1976 441 Pfam No apical meristem (NAM) protein 35 159 IPR003441 GO:0003677|GO:0006355
Bisa04g1976 441 FunFam NAC domain-containing protein 35 42 183 - -
Bisa04g1976 441 ProSiteProfiles NAC domain profile. 33 180 IPR003441 GO:0003677|GO:0006355
Bisa04g1976 441 Gene3D NAC domain 42 183 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1976 Bisa-ChrBisa04 62376398 62379016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1976 19 244 NAC Transcription Factor Family AT1G26870 43.802 3.13e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa04g1976 NAM 1.9e-34 No_clan