Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1946 ATGTCTGAAGACGCTAGCCCAATGCTGGTGGTTTATGATGATCCCTCAGATCAGCGATCATTATCTTTGGATGATACAAGCAGCACAGAAGAATCACCAGATGAGACCAGGCTCTCGTTGGAAACTACTAATGATGCAATTCCATATATTGGCCAAAGATTTAGCACTCATGATGCTGCTTATGAATTTTATAGTGAATTTGCCAAGCGGTGTGGATTTTCAATTCGACGTCACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTTACTAGACGCTACTTTGTTTGTCACCGTGCTGGTAACACTCCTCTCAAAACATCAACTGAAAGTAAACCTCAAAGAAATCGAAAATCTTCCCGATGTGGATGCCAAGCTTATATGCGCATAAGCAAGACGACAGAATTAGGTGCTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGAACTTTTAGAACCAAACCAAGTTCGATTCCTTCCTGCATATAGAACTATTTCAGATTCAGACAAAAGCAGAATCCTGATGTATGCTAAAACAGGGATTTCTGTCCATCAAATGATGCGGCTTATGGAGCTTGAGAAGTGCGTGGAACCTGGATATCTGCCTTTTACTGAAAAGGATGTGAGGAATTTACTTCAATCATTTAGGAAATTAGATCCAGAAGAGGAAAGTATAGATCTATTAAGAATGTGCAGAAATATTAAGGAGAAAGACCCTAATTTCAAATTTGAGTTCACACTTGATACGAATAACTGTTTGGAGAATATAGCCTGGTCCTATGCCTCATCAATACAGTCATATGATATCTTTGGTGATGCAGTGGTATTTGATACAACACATCGCCTGACTGCATTTGACATGCCGCTGGGTATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGCGTGCTTCTACGTGAAGAAAACTTGAGGTCGTATTCATGGGCATTGAAGGCATTCTTAGGGTTTATGAATGGGAAGGTTCCTCAGACAATACTAACTGACCAAAATATGTGTCTCAAAGAAGCATTAGCCATGGAAATGCCTACAACCAAACATGCTCTTTGCATATGGATGATTGTAGCGAAGTTTCCTTCTTGGTTTAGTGCTGTTCTTGGAGAGCGTTACAATGAGTGGAAGGCTGAATTTTATAGACTATACAATCTTGAGTCAGTTGAGGATTTTGAATTGGGTTGGAGGGATATGGTCAGTTCTTTTGGGTTGCATGCCAGCAGGCACATTGCCAATTTATATAGTTTACGCTCACTGTGGGCATTGCCATTTTTGAGAAGCCATTTTTTTGCGGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGGTTTCTGAGTGCACAGACTCGGCTTGCACACTTTGTGGAACAGGTAGCTGTTGCTGTTGATTTCAAAGATCAAACTGGAGAACAACAAACAATGCAACAGAATCTCCAAAATATCTGCCTCAAAACTGGAGCCCCCATGGAGTCACATGCTGCCACAATTCTCACTCCTTTTGCCTTCTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCATCTTTTCCATTCGAAGATGGTTTCCTTGTGAGGCACCATACAAAAGCTGAGGGAGGTCGCAAAGTTTATTGGGCCCCTCGGGAAGGAATAATAAGTTGCAGTTGCCACCAGTTTGAGTTCTCGGGAATTCTCTGTCGGCATGCTCTTAGAGTTCTTTCAACAGGAAATTGCTTTCAGATCCCAGATAGATATCTTCCCTGTCGTTGGCGTCGTATCAACATGACCTCCACTAAGCTTCTTCAGAGTGCACCTAACGATCATGCAGAAAGAGTACAGTTATTACAAAATATGGTTTCTTCTCTTATCACAGAATCTGCCAAGTCAAAGGAAAGACTGGATACTGCATTAGAACAAGTTTCAGTGCTTCTGTCCCGAATAAAAGAGCAACCAGTTTCATTACAAGGTGTCAGAGATATTTCTGGTATTGGTAGGAATCTTTGA 2040 0.4132 MSEDASPMLVVYDDPSDQRSLSLDDTSSTEESPDETRLSLETTNDAIPYIGQRFSTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPLKTSTESKPQRNRKSSRCGCQAYMRISKTTELGAPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKSRILMYAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESIDLLRMCRNIKEKDPNFKFEFTLDTNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNGKVPQTILTDQNMCLKEALAMEMPTTKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFGLHASRHIANLYSLRSLWALPFLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPFEDGFLVRHHTKAEGGRKVYWAPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPCRWRRINMTSTKLLQSAPNDHAERVQLLQNMVSSLITESAKSKERLDTALEQVSVLLSRIKEQPVSLQGVRDISGIGRNL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1946 679 MobiDBLite consensus disorder prediction 1 42 - -
Bisa04g1946 679 Pfam MULE transposase domain 278 370 IPR018289 -
Bisa04g1946 679 Pfam SWIM zinc finger 560 587 IPR007527 GO:0008270
Bisa04g1946 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
Bisa04g1946 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 655 IPR031052 GO:0006355
Bisa04g1946 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Bisa04g1946 679 SMART 26again6 564 591 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1946 Bisa-ChrBisa04 61551393 61554204 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa04g1946 MULE 8.5e-18 CL0219