Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1927 ATGGAAAAAGTGGAGCACTATTGCAAAACAGAGCCGCTTGATTTCCCAAAAATGGAAAAGGTGGAGCCCTTTTGCAAAACAGAGCCGCTTGATTTCTCATTCCCAAAAATGGAAAAAGTGCAGCACTATTGCAAAACAGAGCCGCTTGATTTCCCAAAAATGGAAAAGGTGGATTCGTTTTGCAAAACAGAGCCACTTCATTGTCCCAAAGCAGAACAGGTGGAGTTTCATGTTCAACAACAGATAGCTCAACAACTTCAACTGCAGCTTACAGTGATGGAAGGGGATAGGGATCACCTAAATTCCATTTCATTATTAAATTGCATTACAACAGATGATGCATTACAAACTTTTAGTGAGAAGAGGTTCAAGGACCAAAAGCAGAATGCGTACAGAAAAAGGGTGACTAAACGAAGGACGAGAAGAGGACTTACAGTCGTTGGACCCAGTTGGAGGAAATATCGTCAAAAGGAGATTTTGGGAGCCAAATATCCAAGGTGGCCCACTAGAAGTACAACAGGATGCTATGCCACAAAGCAAGTGCAAAGAATAGAGGAAGAACCAACTGTCACAAAATTGACACAAGCTTTTTCTACTTTTAAGGGAAAGCAAATTACAACACCTGATGACTCTGACATGATGACTCCATTAGGAACAGAGAATAATAATAGTGTCGTGGGTCCAGCATGTACAACAGTGGTTGAGCCATTACAAGCTTGTGGAGAGAGGATCTCCCATGACCAAAAGCCAGGTTTCTACAAGAATAGGATCACCTATTATGGCGATCACACTTGCGAAAACTTGAAGAAGCATGAGTTCATTTTAGATTCTGATTCTCCTTCAGACACTTCCATCTTACATGGCTTTGAGAACCCTCTTCCAATCAAACAAGACCAGTACTCCTCTGTCTCATCATCTCTTACCCCAGTGAAAGAAGAGCCTAAGGAAGGGACTCTTTGGTCTTCATTCAATGATTTTCCTGAGTTTGAGTTCTTTAATTTTCTCAGATCATCTCTCACCCCAGTGAAAGAAGAGACTTGTTGGTCTTCTCTCGATGATTTCCTTTCAGAACTTTGA 1077 0.4141 MEKVEHYCKTEPLDFPKMEKVEPFCKTEPLDFSFPKMEKVQHYCKTEPLDFPKMEKVDSFCKTEPLHCPKAEQVEFHVQQQIAQQLQLQLTVMEGDRDHLNSISLLNCITTDDALQTFSEKRFKDQKQNAYRKRVTKRRTRRGLTVVGPSWRKYRQKEILGAKYPRWPTRSTTGCYATKQVQRIEEEPTVTKLTQAFSTFKGKQITTPDDSDMMTPLGTENNNSVVGPACTTVVEPLQACGERISHDQKPGFYKNRITYYGDHTCENLKKHEFILDSDSPSDTSILHGFENPLPIKQDQYSSVSSSLTPVKEEPKEGTLWSSFNDFPEFEFFNFLRSSLTPVKEETCWSSLDDFLSEL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1927 358 Gene3D WRKY domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1927 358 Pfam WRKY DNA -binding domain 150 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1927 358 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 121 194 IPR044810 GO:0003700
Bisa04g1927 358 ProSiteProfiles WRKY domain profile. 140 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1927 358 SUPERFAMILY WRKY DNA-binding domain 148 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1927 358 SMART WRKY_cls 150 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1927 Bisa-ChrBisa04 59741585 59752058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1927 150 194 WRKY Transcription Factor Family AT3G56400 57.143 5.64e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa04g1927 WRKY 2.4e-08 CL0274