Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1923 ATGGAAAAAGTGGAGCCGGTTTGCAAAACAGAGCCACTTCATTTTCCCAAAGCAGAACAAGTGGAGTCATTTGCCAAAATGGAGCCACTTGATTTTGCTAAAACCAAGACAGTGAAGCTGTTTGGCCAACCACTGTTTGAATCCAAGTTTTTCAATGAAGAAAGAAAGCATATACTCTTGCGTTTGGGCAGGATAAGAGATTTCATCAGCCTCTTGCTGAATTACCCCATGAGAATAGTGCATGACAGGAAACTCAAGGTTTGGACTCTTGAACTTTTGAATGGGAAACATTTGAGAGCAGATTTACGCAGTCTACTAAATGAGAATCCCCTTGAATGCTTGGAAGGATTAATACCAAGGGAAATATTAAAGGGCATTGAAGCAGGCTGGAGTTCCATGTTTGTTGATAAGAAATTTGATATAATGACTCAATTAGGGGTAGATGATGATATTGACAATGGTCCAGGTGAACCATTACAACCTTTTAGTGAGAGGATCTTCAAGGAACAAAATCATAATGTACAAAGAAGGAGCGAGACTATGCTGAGGTGGACAAGAAAAGGGCCTATAGGGGATGAATACAAGTGGAGGAAATATGGTCAAAAAGTTATTTTAGGAGCCAAATATCCAAGAGTCTATTATAGATGCATTTATAGAAATACACAAGGATGCTATGCTACAAAGCAAGTGCAAAGAACAGAGGAAGACTCAACTATCTTCGAAATCTCTTATGGGGGAAGACATACTTGCATAAAAGAATCCATTGACGACTTGTTTGTAAGTGATTCTACTCACACTCACAGTGGCAAGCAGGCCTCCTATGCAGTTCATGAGCTATCTTCTTCAATGGACGACTCTAGTTTTACACAAGATACTTCCCCCGAATGGGCATTTGTGGAATCTGTTTTGTCGAATCATGATGTCAAATCTGTTTTCACAGAAGCCATCTCTAAGTACTCCACTGTCACAAAATTGAGAGAAGCTTCTTCTACTTCTAAGGGAAAGCAAATTTCAACACCAGATGACTTTGACATGATGACTCCATTAGGAACAAAAAATAATAATTTTGACGTTGGTCCAGCAAGTACAACGGTGGTTGAGCCATTACAAGCTTGTGGAGAAAAGCGAGGTGCCTACAGGAGGAGAAAGACTGCAAAAAAGTCAGAAAAATATACAGATGTTCTTATTGATGATGGACATAATTGGAGGAAATATGGCCAGAAAATCATTCTTAATGCCAAGTATCCAAGAACCTATTTCAGATGCATTCATAAATTTGATCAGGGTTGTCAAGCAACCAAACAAGTTCAGAGAATTCAAGAGGATCCTCCCCTATACAGGATCACCTATTATGGCGATCACACTTGCGGAAACTTGAAGAAGCCTGAGGTCATTTTAGATTATGGTCCTCCTTCAGACTCTTCCTTCTTCGCTTTGAGAACCCTCTTTCAATCAAACAAGACCAGTACTCCTCTGTCTCATCATCTCTTACCCCAGTGA 1500 0.3987 MEKVEPVCKTEPLHFPKAEQVESFAKMEPLDFAKTKTVKLFGQPLFESKFFNEERKHILLRLGRIRDFISLLLNYPMRIVHDRKLKVWTLELLNGKHLRADLRSLLNENPLECLEGLIPREILKGIEAGWSSMFVDKKFDIMTQLGVDDDIDNGPGEPLQPFSERIFKEQNHNVQRRSETMLRWTRKGPIGDEYKWRKYGQKVILGAKYPRVYYRCIYRNTQGCYATKQVQRTEEDSTIFEISYGGRHTCIKESIDDLFVSDSTHTHSGKQASYAVHELSSSMDDSSFTQDTSPEWAFVESVLSNHDVKSVFTEAISKYSTVTKLREASSTSKGKQISTPDDFDMMTPLGTKNNNFDVGPASTTVVEPLQACGEKRGAYRRRKTAKKSEKYTDVLIDDGHNWRKYGQKIILNAKYPRTYFRCIHKFDQGCQATKQVQRIQEDPPLYRITYYGDHTCGNLKKPEVILDYGPPSDSSFFALRTLFQSNKTSTPLSHHLLPQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1923 499 SUPERFAMILY WRKY DNA-binding domain 185 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 SUPERFAMILY WRKY DNA-binding domain 393 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 SMART WRKY_cls 396 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 SMART WRKY_cls 190 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 ProSiteProfiles WRKY domain profile. 391 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 Pfam WRKY DNA -binding domain 397 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 Pfam WRKY DNA -binding domain 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 Gene3D WRKY domain 381 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 Gene3D WRKY domain 177 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 ProSiteProfiles WRKY domain profile. 185 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1923 499 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 280 460 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1923 Bisa-ChrBisa04 59651699 59656420 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1923 375 463 WRKY Transcription Factor Family AT3G56400 53.261 3.35e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa04g1923 WRKY 1e-24 CL0274