Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1920 ATGAAGGCGTTGTCTCCGACAAATTCTTCAGCTTCTTTTCTCCTTGAAGATCGTGTGGCAACCTTGGGAGCTGAAGAAGGAGAATCGAAAGGGAAAAACCGACTGGTAGTTGTCACTTGTCATGTTTGTTCTAGAATATGTTTTGTTCTTCTTATTTGTTTATTAAAGTACTATGATCCGATGCCTCAAGGAATTCATGTTGAAGATAGACCTTTTCTGTTTGGCTTACTACTTTGGGAGAAAATGGTGTTAACACATCCTGATTACACTAAAGTAGAGAATTCATGGGAACCTGAATGGAGGAGCAAGCACGTTCGATGGCTTGCATGGTTGACTAAAGCTGGGCAAGGGAGAAAATCATATAGCAAAATTTCAACAAACTTTGGTTTAAAGAAGAAAAAGGGTAGCAAAGGAAGAACAAAGAAGCAAGGTCATTTTCCTTTGGTGGATCAGAGCACTTCCTGCCTTTCTGAAAAGCGCAATATTTCATATACGGAGTTGCATATGGAGTGTGAATATAAGCAGATGAATTTTCATAATGGCAAGGCATGTATTGTTCCCAAAAGAGAAACAGTGGAGAAGTCTGGCAAAACAGAGCCTCTTGATTTCCCTAAAGTGGAGAAAGTGGAGCCATTTTCCAAAATAGAGCTACTTAATTTTCCCAAACACAGAACAACTGAAGCGATTCGCCAAACCGGAGCCACTGCTATTAAGCTGCTTGTTCATCAACTTAAATCAAAGTTATTAAGTGAAAAGAGTAAGAATAGGCATGTATATGTAAGCTTGTGTTTGAGACGGATAACAGATTTTTTCAACCTCTTGTTGAATTACCCTATGAGAACAGTGCATGACAGCAAACTTAAGGGAGACCATGCCAAGGTGGACAAGAGAATAAAATCCTTTGACGACTTGTTTGTAAGTGATTCTATTCATACTCACAGTGGCAAGCAGGCCTCCTGTGTAGTTCCTGAGCTATCTTCTTCAATGGATGACTCTGGGTTTACAGAAGATACTTCCCCCGAATGGGCATTTGTGGAATCTGTTTTGTCGAATCATGATGTCACAGAATTGACACAAGCTTCTTCTACTTCTGAGGAAAGCAAATTTCAACAGCTGATGACTCCATTAAGAATAGAGAATAATAATATTGTCGTGGGTCCAGCAAGTACAACGGTGGTTGAGCCATTACAAGCAAGTGGAGAAAAGCGAGGTGCCTATTGGAGGAGAACCTATTTCAGATGCATTCATAAATTTGATCAGGGTTGTCAAGCAAGCAAACAAGTTCAGAGAATTCACGAGGATCCTCCCCTATACAAGACCACCTATTGTGGCGATCACACTTGCGGAAACTTGAAGAAGCCTGAGGTCATTTTAGATTCTGGTCCTCTTAGCTTTGAGAACCCTCTTCCAATCAAACAAGACCAGTACTCCTCTGCCTCATCATCTCTTACCTTCTTTCGATGA 1464 0.4064 MKALSPTNSSASFLLEDRVATLGAEEGESKGKNRLVVVTCHVCSRICFVLLICLLKYYDPMPQGIHVEDRPFLFGLLLWEKMVLTHPDYTKVENSWEPEWRSKHVRWLAWLTKAGQGRKSYSKISTNFGLKKKKGSKGRTKKQGHFPLVDQSTSCLSEKRNISYTELHMECEYKQMNFHNGKACIVPKRETVEKSGKTEPLDFPKVEKVEPFSKIELLNFPKHRTTEAIRQTGATAIKLLVHQLKSKLLSEKSKNRHVYVSLCLRRITDFFNLLLNYPMRTVHDSKLKGDHAKVDKRIKSFDDLFVSDSIHTHSGKQASCVVPELSSSMDDSGFTEDTSPEWAFVESVLSNHDVTELTQASSTSEESKFQQLMTPLRIENNNIVVGPASTTVVEPLQASGEKRGAYWRRTYFRCIHKFDQGCQASKQVQRIHEDPPLYKTTYCGDHTCGNLKKPEVILDSGPLSFENPLPIKQDQYSSASSSLTFFR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1920 487 ProSiteProfiles WRKY domain profile. 403 446 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1920 487 SMART WRKY_cls 400 450 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1920 487 SUPERFAMILY WRKY DNA-binding domain 404 449 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1920 487 Pfam WRKY DNA -binding domain 407 448 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1920 487 Gene3D WRKY domain 397 450 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1920 487 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 404 463 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1920 Bisa-ChrBisa04 59571753 59586126 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1920 401 454 WRKY Transcription Factor Family AT2G46400 46.296 2.28e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa04g1920 WRKY 1.3e-10 CL0274