Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1916 ATGGAGACAAGTGCATCGCTCATCCCGCAATCAATATCTTATGGAGAAAATGGGAAGAAAATCACTACATTAAGGAAGCGGGATATGTTATTGTGCCTAACGAGGATAAGAAACTTTATCAGCCTCTTGTTGAGTTACCCTATTAGAACACCACAAGATGGCAGACTCAAGGATTGGATTAATGGCGTTTCAGACCCTCAAAATCTGACTGTACGAGAAAAGTTGTATCATTTGTCTCAGAGGCCACTTAGATATGTGGAAGGAATTGTACCAGTGGAAATCATATGGGAGATAGAAGCAGGTGGGTCAATTGGTGAGCCATTACTGTCTTGGAGCAACAAGGGTTTCAACAACCAAAAGCCAAATGCCTACGAAAAGAGGTCGACTTTGCCAACATGGACTACCTATACTCGTGATTTTGACGATGGATTCACTTGGAGGATGTATGGACAAAAAGAAGTTTTTGGAGCAAAGTTTCCCAGAAGCTATTACAGATGCAATCACTGCTCTGCTAAAAAGCACATGCAAAGATCTGAAAAAGACCCAACTATCTTTGAAATGACTTACAAGGGAATACACACTTGCACACAAGCCACCAAGGGAAAACACAGGGGAAAGTAG 621 0.4171 METSASLIPQSISYGENGKKITTLRKRDMLLCLTRIRNFISLLLSYPIRTPQDGRLKDWINGVSDPQNLTVREKLYHLSQRPLRYVEGIVPVEIIWEIEAGGSIGEPLLSWSNKGFNNQKPNAYEKRSTLPTWTTYTRDFDDGFTWRMYGQKEVFGAKFPRSYYRCNHCSAKKHMQRSEKDPTIFEMTYKGIHTCTQATKGKHRGK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1916 206 SMART WRKY_cls 140 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1916 206 Gene3D WRKY domain 129 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1916 206 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 125 199 IPR044810 GO:0003700
Bisa04g1916 206 SUPERFAMILY WRKY DNA-binding domain 138 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1916 206 ProSiteProfiles WRKY domain profile. 141 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1916 206 Pfam WRKY DNA -binding domain 141 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1916 Bisa-ChrBisa04 59443775 59447656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1916 125 198 WRKY Transcription Factor Family AT4G11070 52.273 4.29e-24 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa04g1916 WRKY 7.2e-23 CL0274