Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1913 ATGAGTTCATCCAAGAGCAAGGGCGAGGGAGATGACTCTCCATCAGAAAATATAGAGAAGAAACAGCATCTGCTAGAGAAGAACTCATATGAGAACCTGAAGAAAGGACGATTAGGATTGTCTGAGCCACCAAAAGTTTGGGATTGGCATGGCGCTGCAGAAATTGAACAGATGCACATTAACATATCGAAGCTACCAGAATCCCTGAACTGCCCCAAACTTGAAGGTCTGTACATGCATGGCAATGCCAATTTGACTACAATTCCCAGATTATTTTTCCAGTATATGCCTGTGCTCCATGTCTTGGACTTGTCCTACACTGGCATACAAGGTTTACCAATTTCAATTTTCAAGTTGGCACAACTAAAAACCTTGTATTTGAGAGGATGTGAGCAATTCAAGCAGTTACCTCCAGAAATTGAGCAACTTAAGAATCTTGAGAAACTTGATCTTGATGGAACTCCAATTACACATCTTCCACCATCTCCAAACTTCCCCAAACTGAGAAGTTTATTGGAAATGTTGGATGGAGAAGTTGACATAATGACTCGGTTAGGGGTAGCTGATGATATTGATAATGGTCTAGGTAGGACAATATGTGGGACATTGCAGTCAATTAGTGAGCGGACCTTCAAGGACCGAAAGCAAAATGCCAAAAAAATGGGAATTACTTGGTCAGTGATAGAAAAAATATCTGAAGGTGAAGAGACTTTTGATGATGGATATATTTGGAGGAAATATTGGCAAAATCACATTCTTGGAGACAAATATCCTATAAGCTACTACTGGTGCATTCATAGAAATGGTAGAGGATGCTTGGCTAAAAAGCAAGTGCAAAGATTTGACTTCGACCCAACTATGGTTGAGGTCACTTACAGGGGACTACACACTTGCACACATGCCTTCAATGACGACTTGGTTGTAAGAGATTCTACTCGCACTCATAGTGGAAAGCACAAAGGCATGTGGGCCTCCAATACCGCTCTTGAGTCATTTTCTTCTAGCACACAAGGTACTCACACTGAAATCACATGGGCCAACTGGCATCTGTTTGATAACGAATCTGTTTTCACTGAAGTCTCCTGTGACGACTCTTCCGACTCAGAATTGACAGAATATTCTACTTCCACGGGAAGATTCAGTTTCGTGCTTGACCCCTTTCTCCAATCATCTCTTCCTCCATTTAAAAAAGAATGTAAGGAAGAGATTTCAACTGATGATGATCAGGTTGTATTTGATAACTAG 1245 0.4104 MSSSKSKGEGDDSPSENIEKKQHLLEKNSYENLKKGRLGLSEPPKVWDWHGAAEIEQMHINISKLPESLNCPKLEGLYMHGNANLTTIPRLFFQYMPVLHVLDLSYTGIQGLPISIFKLAQLKTLYLRGCEQFKQLPPEIEQLKNLEKLDLDGTPITHLPPSPNFPKLRSLLEMLDGEVDIMTRLGVADDIDNGLGRTICGTLQSISERTFKDRKQNAKKMGITWSVIEKISEGEETFDDGYIWRKYWQNHILGDKYPISYYWCIHRNGRGCLAKKQVQRFDFDPTMVEVTYRGLHTCTHAFNDDLVVRDSTRTHSGKHKGMWASNTALESFSSSTQGTHTEITWANWHLFDNESVFTEVSCDDSSDSELTEYSTSTGRFSFVLDPFLQSSLPPFKKECKEEISTDDDQVVFDN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1913 414 Gene3D Ribonuclease Inhibitor 3 214 IPR032675 -
Bisa04g1913 414 Gene3D WRKY domain 224 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1913 414 MobiDBLite consensus disorder prediction 9 25 - -
Bisa04g1913 414 Pfam Leucine rich repeat 72 130 IPR001611 GO:0005515
Bisa04g1913 414 SUPERFAMILY WRKY DNA-binding domain 236 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa04g1913 414 Pfam WRKY DNA -binding domain 239 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1913 414 ProSiteProfiles WRKY domain profile. 233 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1913 414 SMART WRKY_cls 238 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa04g1913 414 MobiDBLite consensus disorder prediction 1 25 - -
Bisa04g1913 414 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 212 322 IPR044810 GO:0003700
Bisa04g1913 414 SUPERFAMILY L domain-like 40 171 - -
Bisa04g1913 414 ProSiteProfiles Leucine-rich repeat profile. 145 166 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1913 Bisa-ChrBisa04 59393326 59396642 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1913 139 303 WRKY Transcription Factor Family AT5G24110 33.333 5.48e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa04g1913 WRKY 1.1e-18 CL0274