Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1907 ATGTTTTCTGCAATGGGAAGGAAAAAGACAGAGGATGCTGGCCCCACCACTAAGGCTAAGCCAAGTGGCAAAGATGCGCCTAAGAAGGACAAGTTATCTGTCTCTGCCATGCTGGCGAGTATGGATGAAAAACCTGAAAAACCCAAGAAAGTCTCTTCTTCCTCCAGCAAGTCCAAGGCAAAATCTGCTCCAAAAGTTTCTGCATACACTGATGGTATTGATCTTCCTCCATCTGATGACGAAGAAGATGATGTCATGGAAGAGGAGGAACAGCAAAGTAATGTGCCTAAGCGGTCTCAGCAGCAGAGGCCTGACCTGAAGCCTCTTGATGTATCTGTTTCAGACAAAGAATTAAAAAAGCGGGAGAAGAAGGATCTTCTTGCTGCACATGCTGCTGAGCTGGCTAAGCAGGAGGCTCTAAAGAATGACCATGATGCTTTCACTGTGGTCATTGGAAGCCGTACTTCAGTGCTTGATGGAGAAGATAACGCTGATGCTAATGTAAAAGATATAACAATAGATAATTTCTCTGTGTCAGCTCGGGGTAAAGAACTACTGAAGAATGCATCAGTGAGAATTTCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAATGGGCAAGACCACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACAGCCCTTGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAGACCCGACAGGAAGTTGCCCTTCTGCAGAATGCAACTTCTGTTGAAGGAAGTGCAGACACAGACAATAATTATGAAGATGATACAGGAGAGAAGCTTGCTGAGCTGTATGAAAAATTGCAGATAATGGGATCTGATGCTGCTGAAGCTCAAGCATCAAAGATTCTAGCTGGTTTGGGTTTTACAAAGGATATGCAGGGCCGTGCTACAAAATCATTTAGTGGGGGCTGGAGAATGAGAATTTCTTTAGCCAGAGCACTTTTTGTGCAGCCAACTCTATTATTACTCGATGAGCCCACAAATCATCTTGATCTGAGGGCTGTTCTCTGGTTGGAGGAGTACTTGTGTCGTTGGAAGAAGACTTTGGTGGTTGTTTCACATGATAGGGATTTCCTCAATACAGTTTGCACTGAGATTATTCATCTGCATGATTTGAAACTCCATTTTTATCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAACGCCGAAAGGAAATGAATAAGAAGTTTGAGATTTTTGACAAGCAGCTGAAAGCAGCCAAAAGGAGTGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCAGCTTCCAAGGAAGCATCAAAAAGCAAAGGCAAGGCCAAGGCCAAGGTTGATGAGGATGAAGCTCCAGTCGACCTTCCCCAAAAATGGAGGGATTACAGTGTTGAGTTCCACTTTCCTGAACCTACTGAGCTAACACCTCCACTTCTGCAGCTTATTGAAGTTAGCTTCAGCTACCCAAATCGGGAGGATTTTAGACTTTCAAATGTTGATGTTGGTATTGATATGGGGACTCGTGTTGCCATTGTTGGGCCCAATGGAGCTGGGAAATCTACCCTGCTTAATCTTCTTGCTGGTGATTTGGTTCCAACTGAGGGTGAAGTACGAAGAAGTCAGAAGTTGAGGATTGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACAATGGACGAAACACCCGTTCAGTATCTTCTTCGTCTCCACCCAGACCAGGAGGGACTTAGCAAGCAGGAGGCTGTTCGAGCAAAACTTGGTAAGTTTGGACTACCTAGTCATAATCATCTTACCCCTATTGCCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTCTTCACATCAATATCTATGTCAAAACCACATATTTTACTGTTGGATGAACCCACTAATCATCTAGATATGCAAAGTATAGATGCATTAGCTGATGCACTCGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGGTTGATATCACATGTATGTGAGGATGAAGAGAGGAGCCAAATCTGGGTAGTTGAGGATGGTACTGTCAGAACTTTTGATGGAACTTTTGAGGATTACAAGGAGGAGTTGTTGAAAGAAATTAAAGCAGAAGTTGATGATTAA 2199 0.4334 MFSAMGRKKTEDAGPTTKAKPSGKDAPKKDKLSVSAMLASMDEKPEKPKKVSSSSSKSKAKSAPKVSAYTDGIDLPPSDDEEDDVMEEEEQQSNVPKRSQQQRPDLKPLDVSVSDKELKKREKKDLLAAHAAELAKQEALKNDHDAFTVVIGSRTSVLDGEDNADANVKDITIDNFSVSARGKELLKNASVRISHGKRYGLVGPNGMGKTTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQEVALLQNATSVEGSADTDNNYEDDTGEKLAELYEKLQIMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKFEIFDKQLKAAKRSGNRVQQEKVKDRAKFAASKEASKSKGKAKAKVDEDEAPVDLPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISHVCEDEERSQIWVVEDGTVRTFDGTFEDYKEELLKEIKAEVDD 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1907 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 171 431 IPR003439 GO:0005524
Bisa04g1907 732 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 124 726 - -
Bisa04g1907 732 SMART AAA_5 531 707 IPR003593 GO:0016887
Bisa04g1907 732 SMART AAA_5 195 400 IPR003593 GO:0016887
Bisa04g1907 732 ProSitePatterns ABC transporters family signature. 328 342 IPR017871 GO:0005524|GO:0016887
Bisa04g1907 732 MobiDBLite consensus disorder prediction 1 118 - -
Bisa04g1907 732 Gene3D - 169 465 IPR027417 -
Bisa04g1907 732 Pfam ABC transporter 522 657 IPR003439 GO:0005524
Bisa04g1907 732 CDD ABCF_EF-3 505 707 - -
Bisa04g1907 732 MobiDBLite consensus disorder prediction 438 475 - -
Bisa04g1907 732 Gene3D - 469 732 IPR027417 -
Bisa04g1907 732 Pfam ABC transporter 186 356 IPR003439 GO:0005524
Bisa04g1907 732 Coils Coil 247 267 - -
Bisa04g1907 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 719 IPR027417 -
Bisa04g1907 732 CDD ABCF_EF-3 171 401 - -
Bisa04g1907 732 FunFam ABC transporter F family member 4 470 732 - -
Bisa04g1907 732 FunFam ABC transporter F family member 4 169 452 - -
Bisa04g1907 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 417 IPR027417 -
Bisa04g1907 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 505 730 IPR003439 GO:0005524
Bisa04g1907 732 MobiDBLite consensus disorder prediction 75 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1907 Bisa-ChrBisa04 59177657 59181289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1907 504 683 Calmodulin-binding Proteins AT2G36910 30.583 4.46e-14 74.3