Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1905 ATGGGTTGTTTATGCCCAAAAGGAACTACTGCTGATGATTACGTTGCAAAGAACCATGTCAGAAAGGCAAGGAAATCAAGGAGGGAACGGAGAGGTTCAACGGAAGTCGACGGTGGTCGAAGTGAAGCTACTACATGCTTGATATTGTCAGAGGAGAGGGAGAGGAATGAGGAGAGGAAGAGGAACGAGGAGAGGGAGAGGAATAAGGAGAGGGCAGAGAAACCTGGGACCTCGCAAGTTCAGAATTACAAGGGGTCTAAAGCTGGATATACGAGTGGAGAACAAGGACTACAACCAAGGATATCTAGGATAGGTAGCATAAATAGAGGGGAAAGAGGAGCTCAAGTTCTTGCTGGTTGGCCTTCTTGGCTTACTACTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGAGCTGACTCGTTTGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGCGTTTACAGAGCTCGTGATCTGGACACAAACAAGATTGTAGCATTGAAGAAGGTTCGATTTGCAAATATGGATCCAGAAAGTGTTCGTTTTATGGCTAGAGAAATAATTATACTACGAAGACTTAATCATCCAAATGTCATGAAGCTTGAAGGCATGATAACTTCAACAGTTTCTGGCAGCTTGTACCTTATTTTTGAATATATGGAGCATGATCTCACAGGGCTTGCAGCTCTCCCTGGCGTCAAGTTTTCTGAAGCACAGATAAAATGCTACATGCAACAGTTACTTAGGGGTCTGGAGCATTGCCACAGCCACGGCGTGCTGCACCGAGACATAAAGGGCTCGAATCTTCTGGTTGACTATAACGGCAACCTGAAGATCGGTGATTTTGGACTCGCCACTGTGTTCGAACCATCTCAGGGACAACCAATGACAAGCCGAGTGGTAACCTTGTGGTACCGATCACCTGAACTTTTACTTGGGGCTACAGATTATGGCGTTGCTATTGACTTGTGGAGTACTGGTTGCATTCTTGCAGAGTTGTTTGCTGGCAAGCCCATTATGCCTGGACGAACTGAGGTGGAGCAACTCCATAAAATCTTCAAACTCTGCGGATCGCCTTCCGAAAATTACTGGAAGAAGTTGAAGCTACGAAATTCAACAATTTTCAAACCTCAACATCCTTACAGGCGTGTTGTTGCGGAGACATTCAAGGGTTTTCCAAAATCTGCACTCAACCTTTTGGAAGTCCTTCTTGCTATAGAACCTGAGAATCGAGGAACTGCTTCTTCAGCTCTTCAGAATGAGTTCTTCACAACAAAGCCGCTTCCTAGTGATCCATATACTTTGCCAAAGTACCCGCCCAGTAAGGAGTACAATGTCAAGTATAGAGAAGAGGAACCCAGAAGGGGAAGAGCTGCTGTTAACAAAGGACATGATAAAGAGTCCGTTAAGATTTCCAAAACATCCAGAGCCACGTCAGCACCTGAGGCTAAGGCTGTTTTGCCGTCATCCATAGAGAAGAAGCATTTACAGGCTAACCCCAAACGCGTCGAGAGGCGCAGTCACGAAAAGAATGCCCTCCTTATCGATCCCGCAAGGCCAGCAATGCGAGCATCCAAATTCTTCACTTATTCTTGCCAATCGGCGCACCAGAGCGCGTATGGCCCCATGCGCCCTCTGAATCTCAACGCTGAAGAAGAGGTGTTTGGATCGACGAGAAACTCGAGTGCTGGGCTGAGAAAACAGATGTCGTGCTGGACCAGCGCTAACGCCGCCGCGCACTTGTCGAGGTTCTCGAATTCTGTCATGGCCGGTGGCGGCTCGCGTCTTGATATGAGCGGAGGAGGAGACTATTCGTGGCGAGATGATCGGTTTGGTCCGAGACTTAGCCATGCATCTGGAGGAGAATCCTTCCCGTTGCTTGATGGGTGCAAATCTTCTAACAAGGACTTCCATCCTTTTCTCAAGAAGCATGTTGTGGGCTATGCTACCAAAGATGGCAGAATTCATTATTCAGGACCATTGGTCCCTGCGGGGGGAAATCTTGAAGAAATGCTTAAGCAGCATGAGAAACAACTCCGGCAGGCTGTTCGCAAAGCTTGTTTGAATAAACAAAATCTCAATGAGAAAGTGGCCAATCAGAATCACTACTTCACAAGTGAACTTCAGTGA 2142 0.4706 MGCLCPKGTTADDYVAKNHVRKARKSRRERRGSTEVDGGRSEATTCLILSEERERNEERKRNEERERNKERAEKPGTSQVQNYKGSKAGYTSGEQGLQPRISRIGSINRGERGAQVLAGWPSWLTTVAGEAISGWIPRRADSFEKLEKIGQGTYSSVYRARDLDTNKIVALKKVRFANMDPESVRFMAREIIILRRLNHPNVMKLEGMITSTVSGSLYLIFEYMEHDLTGLAALPGVKFSEAQIKCYMQQLLRGLEHCHSHGVLHRDIKGSNLLVDYNGNLKIGDFGLATVFEPSQGQPMTSRVVTLWYRSPELLLGATDYGVAIDLWSTGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSENYWKKLKLRNSTIFKPQHPYRRVVAETFKGFPKSALNLLEVLLAIEPENRGTASSALQNEFFTTKPLPSDPYTLPKYPPSKEYNVKYREEEPRRGRAAVNKGHDKESVKISKTSRATSAPEAKAVLPSSIEKKHLQANPKRVERRSHEKNALLIDPARPAMRASKFFTYSCQSAHQSAYGPMRPLNLNAEEEVFGSTRNSSAGLRKQMSCWTSANAAAHLSRFSNSVMAGGGSRLDMSGGGDYSWRDDRFGPRLSHASGGESFPLLDGCKSSNKDFHPFLKKHVVGYATKDGRIHYSGPLVPAGGNLEEMLKQHEKQLRQAVRKACLNKQNLNEKVANQNHYFTSELQ 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1905 713 Coils Coil 46 73 - -
Bisa04g1905 713 ProSiteProfiles Protein kinase domain profile. 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1905 713 Coils Coil 669 700 - -
Bisa04g1905 713 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Bisa04g1905 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Bisa04g1905 713 FunFam probable serine/threonine-protein kinase At1g54610 226 467 - -
Bisa04g1905 713 MobiDBLite consensus disorder prediction 75 97 - -
Bisa04g1905 713 Gene3D Phosphorylase Kinase; domain 1 138 230 - -
Bisa04g1905 713 SMART serkin_6 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1905 713 PANTHER CELL DIVISION PROTEIN KINASE 141 433 - -
Bisa04g1905 713 MobiDBLite consensus disorder prediction 47 74 - -
Bisa04g1905 713 MobiDBLite consensus disorder prediction 1 97 - -
Bisa04g1905 713 Gene3D Transferase(Phosphotransferase) domain 1 231 466 - -
Bisa04g1905 713 CDD STKc_CDK9_like 143 427 - -
Bisa04g1905 713 MobiDBLite consensus disorder prediction 499 516 - -
Bisa04g1905 713 MobiDBLite consensus disorder prediction 453 516 - -
Bisa04g1905 713 FunFam probable serine/threonine-protein kinase At1g54610 130 225 - -
Bisa04g1905 713 SUPERFAMILY Protein kinase-like (PK-like) 137 434 IPR011009 -
Bisa04g1905 713 MobiDBLite consensus disorder prediction 453 476 - -
Bisa04g1905 713 Pfam Protein kinase domain 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1905 Bisa-ChrBisa04 59146625 59160728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1905 135 466 Core Cell Cycle Gene Families AT5G10270 49.856 7.74e-112 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa04g1905 Pkinase 5.4e-70 CL0016