Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1901 ATGTCAAATGGGTGGAGCCGCCCCAACTTGTCCGACCCGATTGATCTATGGCACACCTTTCGTTCCCCACCATCTACAAAAACCCTACTTTGCTGTGCTCTTCGTACACTTTCTCCTTCACCGTCGCAGCGCTTTGAGCTCCGGAAGAACGCTTGTACTATCTTAGATAAGAGCAGCAGCACGTTTTTCCGTGAAGCCATGGCGCTGATCCTACATGCAGGGAGAAAAACAAACAAGAATGGTTACAAGACACTTATTGCAGCAGAGTACGTGGGTGTGAAAGTTGAATTGGGCCCAGAATTTGAGATGGGTGTCAATAATAAAACACCTGAGTTTCTCAAGATGAATCCTATTGGCAAGGTTCCTGTTTTGGAGACGCCAGATGGTCCAATATTTGAGAGCAATGCAATTGCACGCTATGTTGCACGCTTGAAGGCTGACAATACGTTGTATGGATCCAGTCCGATTGATTATGCCCACATTGAACAATGGATTGATTTTGCATCATTGGAGATTGATGTTAACATTGTCATGTGGTACAGACCAAGAATGGGATATGGTCCATACCTTCCTCCGGTTGAGGAGGCTGTAATATCTGCACTGAAGAGAGCATTGGGTGCTTTGAACACTCACCTTGCTTCTAATACTTACCTGGTTGGGCATTCTGTGACCCTGGCTGACATCATTATGATATGCACTTTATATTATGGTTTCACTGTGCTTATGCCCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAACCAACCAAAGTTCCAAAAAATATTAGGTAAGGTAAAGCAGACTGAAGCTGTTCCTCCTGTTCAGTCTGCAAAGAAGCCTTCCCAGCCCAAAGAATCAGCTAAAACCAAGGCAAAGGATGAGCCAAAAAAGGAAGCTAAGAAAGTGGCTGAAAAACCCAAAGAAGAGGCTGAAGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGACCTTCTTCCGCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACTAAAACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGATATGTATGATCCTGAGGGATACTCTCTTTGGTTCTGTGAGTACAAATACAACGATGAGAATACGGTTTCCTTTGTGACATTGAACAAGGTCAGTGGATTTCTTCAGCGGATGGATCTGGCTCGCAAGTATGCATTCGGGAAAATGCTTGTGATTGGATCAGAACCACCATTCAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAAGAAATCCCAAAATTTGTGATTGATGAATGTTATGACATGGAGCTCTATGAATGGACCAAGGTTGACATCTCAGATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATTGAAGATTATGAGCCTTTTGAGGGACAGCCACTTTTGGATGCTAAGTGCTTTAAGTGA 1464 0.4433 MSNGWSRPNLSDPIDLWHTFRSPPSTKTLLCCALRTLSPSPSQRFELRKNACTILDKSSSTFFREAMALILHAGRKTNKNGYKTLIAAEYVGVKVELGPEFEMGVNNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNTLYGSSPIDYAHIEQWIDFASLEIDVNIVMWYRPRMGYGPYLPPVEEAVISALKRALGALNTHLASNTYLVGHSVTLADIIMICTLYYGFTVLMPKSFTSEFPHVERYFWTLVNQPKFQKILGKVKQTEAVPPVQSAKKPSQPKESAKTKAKDEPKKEAKKVAEKPKEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDYEPFEGQPLLDAKCFK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1901 487 Pfam Elongation factor 1 gamma, conserved domain 326 434 IPR001662 GO:0003746|GO:0006414
Bisa04g1901 487 Pfam Glutathione S-transferase, N-terminal domain 79 143 IPR004045 -
Bisa04g1901 487 SFLD Glutathione Transferase (cytosolic) 81 257 IPR040079 -
Bisa04g1901 487 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 327 487 IPR036433 GO:0003746|GO:0006414
Bisa04g1901 487 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 67 487 IPR044628 GO:0004364
Bisa04g1901 487 Pfam Glutathione S-transferase, C-terminal domain 199 264 IPR004046 -
Bisa04g1901 487 SUPERFAMILY eEF1-gamma domain 327 487 IPR036433 GO:0003746|GO:0006414
Bisa04g1901 487 SUPERFAMILY GST C-terminal domain-like 140 281 IPR036282 -
Bisa04g1901 487 Gene3D - 147 284 - -
Bisa04g1901 487 SUPERFAMILY Thioredoxin-like 75 152 IPR036249 -
Bisa04g1901 487 CDD GST_N_EF1Bgamma 74 144 - -
Bisa04g1901 487 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 327 487 IPR001662 GO:0003746|GO:0006414
Bisa04g1901 487 CDD GST_C_EF1Bgamma_like 157 277 - -
Bisa04g1901 487 SMART EF1G_2 326 434 IPR001662 GO:0003746|GO:0006414
Bisa04g1901 487 FunFam Elongation factor 1 gamma 147 283 - -
Bisa04g1901 487 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 154 282 IPR010987 -
Bisa04g1901 487 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 68 149 IPR004045 -
Bisa04g1901 487 MobiDBLite consensus disorder prediction 291 327 - -
Bisa04g1901 487 FunFam Elongation factor 1B gamma 67 141 - -
Bisa04g1901 487 MobiDBLite consensus disorder prediction 277 334 - -
Bisa04g1901 487 Gene3D Glutaredoxin 68 141 - -
Bisa04g1901 487 FunFam Elongation factor 1-gamma 1 327 487 - -
Bisa04g1901 487 SFLD Main (cytGST) 81 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1901 Bisa-ChrBisa04 59119329 59126709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1901 67 487 Eukaryotic Initiation Factors Gene Family AT1G57720 76.010 0.0 627