Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1886 ATGATCCCGTTGATTGTTCTCGCTCTGTTCTATCTTCTGGGTTCCTGCCTTTCTGCATCCTCTTTGCTTAGTGACTTCCGCGTCTTAGCCTCACTGAAAGAAGGGTTCCAATTCCCAGACCCTGCTCTAAGTACCTGGAACTACTCCAATTCAAGCTCAGTTTGTTCATGGATTGGAATTCGGTGCCACCGTGGTCGAGTTGTGTCAGTGGACTTGACAGATTTGAATCTCTGTGGCTCAGTTGCTCCTTCAGTTTCAAGACTTGATCGGCTCACCCACCTTTCACTTGCAGGAAACAACTTCACTGGCAACATTGAGATCACCAACTTGAGCAGCCTTCAGTTTCTAAACATCTCGAACAACCAGTTCAGTGGCACCTTGGATTGGAACTTCTCTACCATGGCAGACTTGGAAGTTCTTGATGCCTATAACAACAACTTCACTGCCTTGCTTCCAATGGGGATTCTGAGTTTGAAGAAGCTCAGGTACTTGGATCTCGGTGGGAACTTTTTCTATGGCAGAATACCAGAAAGCTATGGAGATTTAGTGAGTTTGGAATATCTCTCACTAGCAGGAAATGATCTTCGAGGGAAAATCCCTGGTGAGTTAGGCAATCTCAGTAACTTGAGGGAGATTTACTTGGGCTATTACAACTCTTTTGAAGGCGGGATTCCAATGGAGCTTGGGAAGTTGGTAAGTTTAGTTCACATGGATCTTTCAAGCTGTGATTTAGATGGTTCAATTCCAAAAGAAATGGGAAACTTGGTGGAGCTTGACACTCTTTACTTGCATACCAATCAGCTATCTGGGTCCATACCAAAGCAACTAGGCAACTTGACCAAATTAATTTACCTTGATCTTTCCAGAAATGCACTCACCGGAGAAATCCCATTTGAGTTCATCAATCTCAAGCAGCTCCAGCTTTTCTATCTCTTCTTGAACAGATTGCATGGGTCCATACCAGACTACATTGCAGAGTTGCCCAATTTAGAGACACTAGCGCTGTGGATGAACAACTTCACAGGAGAAATTCCCCAGAATCTTGGCCTAAATGGGAAACTGCAAATTCTTGATTTGTCCTCCAACAAGCTCACTGGTATAATCCCGCCTCACCTTTGTTCTTCAAACCAACTTAGAATTCTGATTCTCTTAAATAATTTCCTCTTTGGTCCCATACCAGAAGGTCTGGGAACATGTTACAGTCTCACTAGAGTAAGGTTAGGACAGAACTACCTCAATGGTAGCATTCCCAATGGTTTTCTTTACCTTCCTAACCTAAATTTAGCAGAGTTGCAGAACAACTACTTGTCTGGAACCTTGTCAGAGAATGGCAATAGTTCGTCTCAGCCTGTTAACTTAGGCCAGCTCAATTTGTCAAACAATGGCTTATCTGGTCCTTTACCATATTCAATCTCAAATTTCTCTTCCATTCAGATGCTTTTGCTCAGTGGAAACCAATTCTCAGGTCCAATCCCTTCTTCCATTGGAGAACTCCATCAAGTTCTAAAGCTTGATCTTAGCAGAAACTCATTTTCTGCGGTGATTCCACCTGAAATTGGGAACTGTTTCCATCTTACTTACCTTGACGTGAGCCAGAACAACCTCTCGGGATCAATCCCAAATGAGATTTCCAATATCCACATTCTGAATTACTTGAACTTGTCACGAAACCATTTGAACGAAACCATCCCAAAATCAATAGGCACCATGAAGAGCCTCACCACTGCTGATTTCTCCTTCAATGAATTCTCTGGTAAATTACCAGAATCAGGGCAATTCGCCTTCTTCAATGCCTCATCTTTCGCGGGCAACCCTCAACTCTGCGGTTCTCTCTTGAACAACCCTTGTAATTTCACCACAATCACAACGCCTCCCGGGAAAAACTCTGCAGATTTCAAGCTCATCTTCGCCCTTGGCCTTTTAATTTGCTCCCTAGTCTTCACCGTCGCGGCCATAATCAAAGCCAAATCGTTTAGAAAGAACGGCCCCGGTTCATGGAAAATGACAGCATTCCAAAAACTCGATTTCACAGTCTCCGACGTCCTCGAATGCGTCAAGGACGGTAATGTGATCGGACGAGGCGGCGCCGGGATCGTTTACCACGGGAAAATGCCAAGCGGAGTCGAAATCGCCGTAAAGAAACTCCTAGGTTTCGGCGCCAACAGCCACGACCACGGCTTCGGAGCCGAAATCCAAACCCTAGGCAACATCAGGCACAGGAATATCGTCCGACTTCTCGCCTTCTGCTCCAACAAGGAGACGAACCTCCTCGTGTACGAGTACATGCGGAACGGGAGCCTCGGCGAGGCGTTGCACGGGAAGAAGGGGGCGTTTCTGGGGTGGAACCTGAGGTACAAGATCGCGATCGATTCGGCGAAGGGTCTGTGCTACCTGCACCACGATTGCTCGCCATTGATCGTGCACAGAGACGTCAAATCGAACAACATTCTGTTGAATTCAAGCTTCGAGGCACACGTGGCGGACTTCGGGCTCGCCAAGTTCTTGATCGACGGCGGCGCGTCGGAGTACATGTCCACCATTGCAGGATCGTATGGTTACATCGCGCCTGAGTACGCTTATACGTTAAGAGTGGATGAAAAGAGCGACGTTTATAGTTTTGGAGTAGTTTTACTAGAACTGATCACCGGACGAAGGCCAGTTGGAGATTTCGGGGACGGGGTGGACCTCGTGCAGTGGTGCAAGAAGGCGACGAACGGCCGAAAGGAGGAAGTGACGAACATAGTGGACTTGAGGCTCACTACGGTGCCAAAGGAGGAAGCCATGCACATGCTGTTCATAGCCATGTTGTGCCTGCAAGAGAATAGTGTTGTGAGGCCAACAATGAGGGAAGTGGTTCAAATGCTCTCAGAATTTCCTCGTCCTCTCTTAGCCTCACAACATGAGCACAACAATCACCAATCGTCTTCCTCATATTCAAATAGTAACAACAACAACAACATCATTCCAAGCAAAACCCTAGAGAAAGAAAAGCCTTGTCCTCCCACTTTCAAACAAGACCTTTTGGTTTGA 3030 0.464 MIPLIVLALFYLLGSCLSASSLLSDFRVLASLKEGFQFPDPALSTWNYSNSSSVCSWIGIRCHRGRVVSVDLTDLNLCGSVAPSVSRLDRLTHLSLAGNNFTGNIEITNLSSLQFLNISNNQFSGTLDWNFSTMADLEVLDAYNNNFTALLPMGILSLKKLRYLDLGGNFFYGRIPESYGDLVSLEYLSLAGNDLRGKIPGELGNLSNLREIYLGYYNSFEGGIPMELGKLVSLVHMDLSSCDLDGSIPKEMGNLVELDTLYLHTNQLSGSIPKQLGNLTKLIYLDLSRNALTGEIPFEFINLKQLQLFYLFLNRLHGSIPDYIAELPNLETLALWMNNFTGEIPQNLGLNGKLQILDLSSNKLTGIIPPHLCSSNQLRILILLNNFLFGPIPEGLGTCYSLTRVRLGQNYLNGSIPNGFLYLPNLNLAELQNNYLSGTLSENGNSSSQPVNLGQLNLSNNGLSGPLPYSISNFSSIQMLLLSGNQFSGPIPSSIGELHQVLKLDLSRNSFSAVIPPEIGNCFHLTYLDVSQNNLSGSIPNEISNIHILNYLNLSRNHLNETIPKSIGTMKSLTTADFSFNEFSGKLPESGQFAFFNASSFAGNPQLCGSLLNNPCNFTTITTPPGKNSADFKLIFALGLLICSLVFTVAAIIKAKSFRKNGPGSWKMTAFQKLDFTVSDVLECVKDGNVIGRGGAGIVYHGKMPSGVEIAVKKLLGFGANSHDHGFGAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIDSAKGLCYLHHDCSPLIVHRDVKSNNILLNSSFEAHVADFGLAKFLIDGGASEYMSTIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRRPVGDFGDGVDLVQWCKKATNGRKEEVTNIVDLRLTTVPKEEAMHMLFIAMLCLQENSVVRPTMREVVQMLSEFPRPLLASQHEHNNHQSSSSYSNSNNNNNIIPSKTLEKEKPCPPTFKQDLLV 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1886 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 302 956 - -
Bisa04g1886 1009 Gene3D Transferase(Phosphotransferase) domain 1 762 985 - -
Bisa04g1886 1009 Gene3D Ribonuclease Inhibitor 376 616 IPR032675 -
Bisa04g1886 1009 Pfam Leucine Rich Repeat 353 373 IPR001611 GO:0005515
Bisa04g1886 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 219 324 - -
Bisa04g1886 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Bisa04g1886 1009 ProSiteProfiles Leucine-rich repeat profile. 353 374 IPR001611 GO:0005515
Bisa04g1886 1009 Gene3D Ribonuclease Inhibitor 213 369 IPR032675 -
Bisa04g1886 1009 Pfam Leucine rich repeat 503 559 IPR001611 GO:0005515
Bisa04g1886 1009 SUPERFAMILY Protein kinase-like (PK-like) 676 955 IPR011009 -
Bisa04g1886 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 132 218 - -
Bisa04g1886 1009 MobiDBLite consensus disorder prediction 966 1009 - -
Bisa04g1886 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 974 - -
Bisa04g1886 1009 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 24 131 - -
Bisa04g1886 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 761 - -
Bisa04g1886 1009 Gene3D Phosphorylase Kinase; domain 1 652 761 - -
Bisa04g1886 1009 MobiDBLite consensus disorder prediction 966 991 - -
Bisa04g1886 1009 Gene3D Ribonuclease Inhibitor 25 131 IPR032675 -
Bisa04g1886 1009 SUPERFAMILY L domain-like 352 609 - -
Bisa04g1886 1009 Gene3D Ribonuclease Inhibitor 132 212 IPR032675 -
Bisa04g1886 1009 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Bisa04g1886 1009 SUPERFAMILY RNI-like 69 412 - -
Bisa04g1886 1009 SMART serkin_6 685 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1886 1009 ProSiteProfiles Protein kinase domain profile. 685 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1886 1009 Pfam Protein tyrosine and serine/threonine kinase 688 955 IPR001245 GO:0004672|GO:0006468
Bisa04g1886 1009 SMART LRR_typ_2 134 157 IPR003591 -
Bisa04g1886 1009 SMART LRR_typ_2 110 133 IPR003591 -
Bisa04g1886 1009 SMART LRR_typ_2 255 279 IPR003591 -
Bisa04g1886 1009 SMART LRR_typ_2 327 351 IPR003591 -
Bisa04g1886 1009 SMART LRR_typ_2 498 522 IPR003591 -
Bisa04g1886 1009 SMART LRR_typ_2 352 375 IPR003591 -
Bisa04g1886 1009 SMART LRR_typ_2 182 206 IPR003591 -
Bisa04g1886 1009 SMART LRR_typ_2 546 570 IPR003591 -
Bisa04g1886 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1886 Bisa-ChrBisa04 58849815 58856945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1886 17 960 Receptor kinase-like Gene Family AT5G65700 58.542 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa04g1886 PK_Tyr_Ser-Thr 6.1e-42 CL0016